Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MAPK10-303ENST00000641324 3959 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AL049781.1-201ENST00000623195 3585 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AC018529.3-201ENST00000624212 2254 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 Y_RNA.33-201ENST00000362591 102 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 MIR708-201ENST00000390708 88 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AL360182.1-201ENST00000397433 468 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 MIR548K-201ENST00000408406 116 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AC005300.1-201ENST00000428401 373 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AC008155.2-201ENST00000464337 397 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 Y_RNA.675-201ENST00000516389 149 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 RNU6-1088P-201ENST00000516850 104 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AC093027.1-201ENST00000546698 429 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AL355375.2-201ENST00000574825 175 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AC025627.2-201ENST00000576220 160 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AC091178.1-203ENST00000584586 279 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 ATP1B3P1-201ENST00000605365 821 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 RNU1-30P-201ENST00000606575 163 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 uc_338.15-201ENST00000615470 191 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 AL049641.1-201ENST00000441055 1948 ntBASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC85CA6NKD9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 RNU6-7-201ENST00000364784 107 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 RNU6-8-201ENST00000365467 107 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 U3.19-201ENST00000390893 196 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 AC007919.1-201ENST00000429380 217 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 RPL23AP89-201ENST00000439324 255 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 PIGFP3-201ENST00000441918 722 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 RPS3AP46-201ENST00000448352 682 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 RNA5SP103-201ENST00000459503 118 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 AC117503.1-201ENST00000472241 394 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 RPS4XP13-201ENST00000483219 789 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 RNA5SP309-201ENST00000516670 106 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 RNU6-1282P-201ENST00000516735 96 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 AC006064.5-201ENST00000541782 248 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 Z98200.1-201ENST00000607298 470 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 AL138726.1-201ENST00000614873 333 ntBASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC85CA6NKD9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 RNU6-128P-201ENST00000383976 107 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 MIR450B-201ENST00000401182 78 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 RPS4XP7-201ENST00000406274 780 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 RPL5P18-201ENST00000406671 891 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 RNU2-3P-201ENST00000410144 191 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 VN1R36P-201ENST00000414936 291 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AL356535.1-201ENST00000440335 398 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 NDUFB1P2-201ENST00000449477 176 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AC233279.1-201ENST00000455300 423 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AC087884.1-201ENST00000469738 328 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 HMGB1P30-201ENST00000492455 606 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 Y_RNA.673-201ENST00000516306 88 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 RNU6-566P-201ENST00000516790 107 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 SCARNA14-201ENST00000516903 136 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AC091905.2-201ENST00000623143 306 ntBASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AC006026.1-201ENST00000444025 1803 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms