Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 HMGN2P10-201ENST00000448085 265 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AC096751.1-202ENST00000502691 1067 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AC096745.1-201ENST00000509945 370 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 MRPS36P2-201ENST00000512569 299 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 OR5AL2P-201ENST00000532185 920 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 MIR4636-201ENST00000582271 80 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AC109454.4-201ENST00000623411 649 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CNOT1A5YKK6 U8.3-201ENST00000363321 132 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 RNU6-317P-201ENST00000384031 107 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 AL139397.2-201ENST00000404529 772 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 PTGES3P2-201ENST00000407942 482 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 RNA5SP511-201ENST00000410487 115 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.82□□□□□ -2.28
CNOT1A5YKK6 SEPT2P1-201ENST00000419651 180 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.82□□□□□ -2.28
CNOT1A5YKK6 MTCYBP34-201ENST00000439552 670 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.82□□□□□ -2.28
CNOT1A5YKK6 RPS15AP27-201ENST00000449183 343 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CNOT1A5YKK6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.82□□□□□ -2.28
CNOT1A5YKK6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.82□□□□□ -2.28
CNOT1A5YKK6 AC004908.2-201ENST00000609090 574 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 RNU6-19P-201ENST00000384718 107 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.82□□□□□ -2.28
CNOT1A5YKK6 NUP35P2-201ENST00000416748 943 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 MTATP6P7-201ENST00000453315 681 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.82□□□□□ -2.28
CNOT1A5YKK6 AC013244.3-201ENST00000605614 388 ntBASIC0.82□□□□□ -2.28
CNOT1A5YKK6 HAUS6P2-201ENST00000433254 2404 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 RNA5SP347-201ENST00000362445 119 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 RNU6-30P-201ENST00000384561 107 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AL356432.1-201ENST00000405809 419 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AL645638.1-201ENST00000440519 361 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 PABPC1P3-201ENST00000469174 459 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 HMGN1P10-201ENST00000474557 553 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC027575.1-201ENST00000481064 460 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.81□□□□□ -2.28
CNOT1A5YKK6 RN7SKP179-201ENST00000516126 217 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 SNORA31.25-201ENST00000517242 134 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC118273.2-201ENST00000532092 465 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AL391261.3-201ENST00000557194 520 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC005786.1-201ENST00000588553 154 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC025165.5-201ENST00000602802 578 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC243829.6-201ENST00000612652 106 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AL161423.1-201ENST00000613700 262 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 OR5H6-203ENST00000642105 978 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC087359.1-201ENST00000508335 1740 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 RNY4P3-201ENST00000365254 95 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AL161449.1-201ENST00000414531 1199 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC023141.11-201ENST00000508864 202 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.81□□□□□ -2.28
CNOT1A5YKK6 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AP005639.2-201ENST00000527592 928 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 FAM60BP-201ENST00000578364 658 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.81□□□□□ -2.28
CNOT1A5YKK6 VN1R81P-201ENST00000602085 372 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AC113194.1-201ENST00000606037 500 ntBASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.81□□□□□ -2.28
CNOT1A5YKK6 AL161722.3-201ENST00000605789 2983 ntBASIC0.8□□□□□ -2.28
CNOT1A5YKK6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.8□□□□□ -2.28
CNOT1A5YKK6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.8□□□□□ -2.28
CNOT1A5YKK6 RNA5SP391-201ENST00000363456 119 ntBASIC0.8□□□□□ -2.28
CNOT1A5YKK6 RNU6-185P-201ENST00000384421 107 ntBASIC0.8□□□□□ -2.28
CNOT1A5YKK6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CNOT1A5YKK6 AL356776.1-201ENST00000406574 447 ntBASIC0.8□□□□□ -2.28
CNOT1A5YKK6 USP12PX-201ENST00000432383 1057 ntBASIC0.8□□□□□ -2.28
CNOT1A5YKK6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.8□□□□□ -2.28
CNOT1A5YKK6 AGGF1P5-201ENST00000567900 919 ntBASIC0.8□□□□□ -2.28
CNOT1A5YKK6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.8□□□□□ -2.28
CNOT1A5YKK6 AC135507.1-201ENST00000607214 561 ntBASIC0.8□□□□□ -2.28
CNOT1A5YKK6 Z69720.2-201ENST00000624755 279 ntBASIC0.8□□□□□ -2.28
CNOT1A5YKK6 RNA5SP125-201ENST00000364843 120 ntBASIC0.79□□□□□ -2.28
CNOT1A5YKK6 AL513475.1-201ENST00000406602 315 ntBASIC0.79□□□□□ -2.28
CNOT1A5YKK6 RNA5SP193-201ENST00000410353 107 ntBASIC0.79□□□□□ -2.28
CNOT1A5YKK6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.79□□□□□ -2.28
CNOT1A5YKK6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.79□□□□□ -2.28
CNOT1A5YKK6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.79□□□□□ -2.28
CNOT1A5YKK6 AP004247.1-201ENST00000531556 1289 ntBASIC0.79□□□□□ -2.28
CNOT1A5YKK6 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CNOT1A5YKK6 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.79□□□□□ -2.28
CNOT1A5YKK6 AC087465.1-201ENST00000560574 245 ntBASIC0.79□□□□□ -2.28
CNOT1A5YKK6 MIR548Y-201ENST00000582739 110 ntBASIC0.79□□□□□ -2.28
CNOT1A5YKK6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.79□□□□□ -2.28
CNOT1A5YKK6 SNORD14A-201ENST00000606526 91 ntBASIC0.79□□□□□ -2.28
CNOT1A5YKK6 AC079395.3-201ENST00000615161 484 ntBASIC0.79□□□□□ -2.28
CNOT1A5YKK6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CNOT1A5YKK6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms