Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 Y_RNA.639-201ENST00000458981 102 ntBASIC4.29□□□□□ -1.72
CCDC66A2RUB6 RPL21P41-201ENST00000459863 264 ntBASIC4.29□□□□□ -1.72
CCDC66A2RUB6 RPL29P14-201ENST00000495837 428 ntBASIC4.29□□□□□ -1.72
CCDC66A2RUB6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 RPS27P27-201ENST00000498779 255 ntBASIC4.29□□□□□ -1.72
CCDC66A2RUB6 HMGB3P15-201ENST00000507326 574 ntBASIC4.29□□□□□ -1.72
CCDC66A2RUB6 PHBP14-201ENST00000512887 367 ntBASIC4.29□□□□□ -1.72
CCDC66A2RUB6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 SNRPGP16-201ENST00000533275 226 ntBASIC4.29□□□□□ -1.72
CCDC66A2RUB6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 GNRHR2P1-201ENST00000555315 631 ntBASIC4.29□□□□□ -1.72
CCDC66A2RUB6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 BNIP3P22-201ENST00000593399 556 ntBASIC4.29□□□□□ -1.72
CCDC66A2RUB6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC66A2RUB6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 OR4G2P-202ENST00000641004 1759 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 Y_RNA.128-201ENST00000363391 112 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 RNA5SP509-201ENST00000364577 119 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AC068538.1-201ENST00000376856 336 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 RNU6-128P-201ENST00000383976 107 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 RNU6-1181P-201ENST00000384191 106 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 RNU6-45P-201ENST00000384471 107 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AL139397.2-201ENST00000404529 772 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 BTF3L4P3-201ENST00000418879 476 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 RPL21P109-201ENST00000422213 475 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 SNAP23P1-201ENST00000433229 246 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 MTND4P19-201ENST00000446659 478 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 RPL23AP31-201ENST00000456160 467 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 RNU7-152P-201ENST00000458982 64 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AC087588.1-201ENST00000462203 316 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 RPL9P32-201ENST00000464118 620 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AC005741.1-201ENST00000511094 432 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AC099522.1-202ENST00000514718 367 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 APOOP3-201ENST00000536787 586 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AL163153.1-201ENST00000554223 283 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 TVP23BP1-201ENST00000557500 617 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 MTCO3P13-201ENST00000577757 781 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AC012119.1-201ENST00000603184 222 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 AC011944.2-201ENST00000624440 683 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 MIR6830-201ENST00000636015 70 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 U6.98-201ENST00000637157 84 ntBASIC4.28□□□□□ -1.72
CCDC66A2RUB6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC66A2RUB6 MTND4P27-201ENST00000450813 1354 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 PWAR6-201ENST00000552334 4618 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 RNU1-132P-201ENST00000364300 164 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 Y_RNA.534-201ENST00000384599 112 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 PTMAP5-201ENST00000393073 333 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 MIR548P-201ENST00000408336 84 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AC011933.1-201ENST00000413334 321 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 SKA2P1-201ENST00000425592 390 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AL358472.1-201ENST00000431295 329 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AC006539.3-201ENST00000454258 129 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AC117503.1-201ENST00000472241 394 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AC027575.1-201ENST00000481064 460 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AC096576.1-201ENST00000489014 359 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 APOOP4-201ENST00000513530 597 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 RN7SKP122-201ENST00000515923 296 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 MED28P6-201ENST00000558776 231 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AC002545.1-201ENST00000592511 181 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AC080078.3-201ENST00000605407 463 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AC124303.1-201ENST00000605703 360 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AL355365.1-201ENST00000616480 294 ntBASIC4.27□□□□□ -1.73
CCDC66A2RUB6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
CCDC66A2RUB6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms