Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC087369.1-201ENST00000520775 996 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 HMGB1P14-201ENST00000557424 591 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 LRRC37A5P-203ENST00000580181 585 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 AC005344.1-201ENST00000613391 459 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 PLCE1P1-201ENST00000622094 305 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 AC007546.2-201ENST00000623996 360 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 FAM35BP-202ENST00000497389 3337 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 SCN1A-220ENST00000641603 12506 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AC139713.2-215ENST00000641428 5037 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 FTLP6-201ENST00000355274 422 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-601P-201ENST00000384540 107 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 MIR591-201ENST00000385290 95 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 MTHFD2P2-201ENST00000407725 247 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 MIR1271-201ENST00000408537 86 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 RNU2-3P-201ENST00000410144 191 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 RN7SKP158-201ENST00000410453 326 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 MTCO2P12-201ENST00000427426 682 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 SNRPEP4-201ENST00000435815 279 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 HMGN2P20-201ENST00000437531 273 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 RPL7P28-201ENST00000437739 740 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AL135752.1-201ENST00000479477 471 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AC006499.6-201ENST00000511169 607 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AC092436.3-201ENST00000511788 257 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AC009902.1-201ENST00000519351 183 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AC006064.5-201ENST00000541782 248 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 RN7SL435P-201ENST00000584418 282 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AC008638.3-201ENST00000603341 463 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AL627309.6-201ENST00000606857 840 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 MIR8058-201ENST00000615737 89 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 MIR7151-201ENST00000617477 60 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AC010378.1-201ENST00000619270 362 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 XIST_intron.1-201ENST00000619444 68 ntBASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC163A0A0D9SF12 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AC016588.2-201ENST00000632484 3021 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 FRG1CP-201ENST00000358464 769 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 Y_RNA.333-201ENST00000365274 102 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 Y_RNA.394-201ENST00000383942 103 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 MIR10A-201ENST00000385043 110 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 Y_RNA.623-201ENST00000411128 95 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 VDAC1P9-201ENST00000412766 841 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AL592148.1-201ENST00000413568 445 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AC016831.2-201ENST00000417179 352 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AC092047.1-201ENST00000424997 240 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 RPL7P37-201ENST00000425095 738 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 YME1L1P1-201ENST00000429435 297 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 MTND1P17-201ENST00000448961 204 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AC096745.1-201ENST00000509945 370 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-1282P-201ENST00000516735 96 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AC069200.1-201ENST00000609511 323 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AL354798.1-201ENST00000622505 329 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 MIR6500-201ENST00000622700 86 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AC027309.3-201ENST00000623419 351 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AC091152.2-201ENST00000591628 2569 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 AC027290.2-201ENST00000623210 18662 ntBASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms