Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 RNU5A-1-201ENST00000362698 116 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 MIR888-201ENST00000401186 77 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 RN7SKP158-201ENST00000410453 326 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 AL592310.1-201ENST00000414330 671 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 AC244453.4-201ENST00000419150 388 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 NDUFB4P7-201ENST00000423198 363 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 AL592447.1-201ENST00000447592 540 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 NDUFA5P7-201ENST00000452914 242 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 RFC5P1-201ENST00000454419 874 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 PNPLA4P1-201ENST00000458328 305 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 SUMO2P6-201ENST00000505273 288 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 RNU6-551P-201ENST00000516661 103 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 MIR4287-201ENST00000579398 78 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 AC025165.5-201ENST00000602802 578 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 AC004067.1-201ENST00000608733 700 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 DUXAP10-204ENST00000612052 616 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 RMST_10.1-201ENST00000616309 154 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 AC073592.7-201ENST00000623659 507 ntBASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.59□□□□□ -2.15
SCN10AQ9Y5Y9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 RNU6-115P-201ENST00000364310 107 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 MIR514A1-201ENST00000385133 98 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 AL512604.1-201ENST00000404812 257 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 AC096649.2-201ENST00000416186 393 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 AL590383.1-201ENST00000428602 75 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 MTND2P5-201ENST00000432656 1006 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 AC016691.1-201ENST00000441321 413 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 AC013828.1-201ENST00000481845 158 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 AC023141.11-201ENST00000508864 202 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 COL6A4P2-205ENST00000509855 506 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 Y_RNA.675-201ENST00000516389 149 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 AP002906.1-201ENST00000603405 233 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 AL592148.2-201ENST00000612210 372 ntBASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.59□□□□□ -2.16
SCN10AQ9Y5Y9 AC005832.2-201ENST00000538921 1430 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AC007785.2-201ENST00000598627 1916 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 MIR135A2-201ENST00000384854 100 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 SNORA46.1-201ENST00000391069 153 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 HMGB1P49-201ENST00000418882 569 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AL451074.3-201ENST00000437709 472 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 THAP5P1-201ENST00000439089 262 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 MTND3P4-201ENST00000453537 303 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 TOMM22P6-201ENST00000465035 409 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 MTCO2P9-201ENST00000503214 694 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 MRPS17P9-201ENST00000511924 393 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 RNU6-928P-201ENST00000516876 104 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 RNU1-92P-201ENST00000517017 135 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AGGF1P5-201ENST00000567900 919 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AP001269.3-201ENST00000588718 329 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AL109918.3-201ENST00000603072 338 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 uc_338.14-201ENST00000613162 166 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 RNU6-796P-201ENST00000391086 107 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 PSMA6P3-201ENST00000428242 164 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 GPM6BP3-201ENST00000442797 145 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 RPL7P18-201ENST00000478965 734 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 HMGN1P7-201ENST00000491722 313 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 LTV1P1-201ENST00000510683 1237 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 MIR3660-201ENST00000584845 100 ntBASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN10AQ9Y5Y9 RNA5SP325-201ENST00000363756 130 ntBASIC1.57□□□□□ -2.16
SCN10AQ9Y5Y9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
SCN10AQ9Y5Y9 U6atac.2-201ENST00000408644 118 ntBASIC1.57□□□□□ -2.16
SCN10AQ9Y5Y9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.57□□□□□ -2.16
SCN10AQ9Y5Y9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.57□□□□□ -2.16
SCN10AQ9Y5Y9 RPS29P29-201ENST00000456396 171 ntBASIC1.57□□□□□ -2.16
SCN10AQ9Y5Y9 AC055731.1-201ENST00000474387 401 ntBASIC1.57□□□□□ -2.16
SCN10AQ9Y5Y9 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SCN10AQ9Y5Y9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms