Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AL159169.1-201ENST00000421119 127 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 AL669831.1-202ENST00000428504 417 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 OR4C10P-201ENST00000434991 931 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 HSPD1P21-201ENST00000436541 245 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 GTF2IP13-201ENST00000438487 386 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 AC009237.8-201ENST00000445492 379 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 RNU6-329P-201ENST00000459618 107 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 RPS15AP34-201ENST00000487776 387 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 RN7SKP289-201ENST00000517244 295 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 CYCSP30-201ENST00000546447 172 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 HSPE1P5-201ENST00000561489 272 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 BNIP3P25-201ENST00000596023 559 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 RMST_8.1-201ENST00000610287 165 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 AC069234.5-201ENST00000611056 416 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 AC009233.1-201ENST00000616477 371 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PCDHA3Q9Y5H8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
PCDHA3Q9Y5H8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHA3Q9Y5H8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHA3Q9Y5H8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 Y_RNA.61-201ENST00000362835 102 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 RNU6-512P-201ENST00000364438 103 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 RNU6-831P-201ENST00000384548 107 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 RPL7P10-201ENST00000417407 739 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 AL365400.1-201ENST00000431854 640 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 RPL21P41-201ENST00000459863 264 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 RPL7P5-201ENST00000471472 736 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 FGF7P4-201ENST00000509595 295 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 RNU4-49P-201ENST00000516080 140 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 RNU7-30P-201ENST00000516835 62 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 RNU6-143P-201ENST00000516942 93 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 MIR3941-201ENST00000582572 103 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 AL359314.1-201ENST00000616913 261 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 RNA5SP196-201ENST00000625967 102 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 AP000553.6-201ENST00000641242 118 ntBASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHA3Q9Y5H8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 SNORA4.3-201ENST00000365564 137 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 DEFB109C-201ENST00000382575 264 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 DEFB109B-201ENST00000382656 264 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 MIR301A-201ENST00000385261 86 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AL139039.1-201ENST00000401900 692 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 HSPE1P26-201ENST00000405341 275 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 BX682237.1-201ENST00000415016 335 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 CRYBB2P1-203ENST00000415709 538 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 BTF3L4P3-201ENST00000418879 476 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AL591419.1-201ENST00000427423 339 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AL592045.1-201ENST00000429867 352 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 PRPS1P1-201ENST00000445305 876 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 RNU7-167P-201ENST00000459160 62 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AC083904.1-201ENST00000487828 231 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 RNU2-69P-201ENST00000516061 100 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 RNU6-189P-201ENST00000516120 101 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 RNU6-579P-201ENST00000516879 102 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 OR8R1P-201ENST00000543943 764 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AC037471.2-201ENST00000564941 598 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 MIR4742-201ENST00000581069 85 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AC007687.1-201ENST00000602704 304 ntBASIC3.82□□□□□ -1.8
PCDHA3Q9Y5H8 AC103710.3-201ENST00000608157 948 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms