Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 BTF3P12-201ENST00000519620 469 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 AC037471.2-201ENST00000564941 598 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 MIR5685-201ENST00000579080 79 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 MIR5583-1-201ENST00000580941 59 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 AC136601.2-201ENST00000604356 474 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 uc_338.5-201ENST00000611839 155 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 Y_RNA.804-201ENST00000615262 101 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 AC099506.2-201ENST00000623074 221 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 Y_RNA.142-201ENST00000363491 102 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 Y_RNA.414-201ENST00000384011 101 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 RNA5SP44-201ENST00000410446 133 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 RPLP0P7-201ENST00000416050 667 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 UBE2D3P2-201ENST00000424409 445 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AC018644.1-201ENST00000429934 551 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AC073063.1-201ENST00000434352 607 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AC092573.2-201ENST00000434546 243 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 SNRPEP9-201ENST00000436794 238 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AL671855.1-201ENST00000446875 1203 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AL358232.1-201ENST00000448030 501 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AC006517.1-201ENST00000480485 328 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AC008549.1-201ENST00000512900 643 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 SNORA70.14-201ENST00000516205 110 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 RNU6-1038P-201ENST00000516516 104 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 RNA5SP143-201ENST00000516936 115 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AC069113.1-201ENST00000517763 267 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AP000763.2-201ENST00000540641 163 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 SYF2P1-201ENST00000550658 413 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AC090115.3-201ENST00000553218 849 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AL118558.2-201ENST00000556294 238 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AC008739.3-201ENST00000603262 127 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AC009994.1-201ENST00000606889 253 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 MIR6076-201ENST00000617521 113 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 SNORD39.4-201ENST00000620099 78 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 MIR6500-201ENST00000622700 86 ntBASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA3Q9Y5H0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 MIR412-201ENST00000362142 91 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 RNU6-797P-201ENST00000363101 109 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 RNU6-140P-201ENST00000384566 108 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 RNU6-1025P-201ENST00000410629 104 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 RHEBP3-201ENST00000411920 351 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 HSPE1P12-201ENST00000412576 301 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 HSPE1P1-201ENST00000421494 318 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AC017083.1-201ENST00000428093 483 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AL133547.1-201ENST00000448546 220 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 CECR9-201ENST00000453421 199 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 snoU13.22-201ENST00000459428 104 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 DYNLL1P5-201ENST00000467158 270 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 RPL21P13-201ENST00000488305 481 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 SUMO2P6-201ENST00000505273 288 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 RNA5SP165-201ENST00000517142 115 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 CASP1P1-201ENST00000526345 212 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AC012119.1-201ENST00000603184 222 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AL355598.1-201ENST00000604169 202 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 DUSP12P1-201ENST00000612874 516 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AC104985.2-201ENST00000620598 500 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AC039056.2-201ENST00000622261 511 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 AC066616.2-201ENST00000559334 1481 ntBASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHGA3Q9Y5H0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHGA3Q9Y5H0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHGA3Q9Y5H0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms