Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MRPS17P3-201ENST00000465453 385 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 RBM43P1-201ENST00000476891 1081 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 FABP5P5-201ENST00000515537 406 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 MTND2P38-201ENST00000522536 667 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AC022878.1-201ENST00000530684 149 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 ARL2BPP2-201ENST00000550907 489 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 ZNF861P-201ENST00000588126 639 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 HMGN1P30-201ENST00000589286 268 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AC012119.1-201ENST00000603184 222 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 OR2AS2P-201ENST00000606902 342 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AC138749.5-201ENST00000611461 208 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AC008498.1-201ENST00000613012 531 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AC116165.2-201ENST00000616705 206 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AC092140.2-201ENST00000618027 521 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 AC025048.6-202ENST00000627667 438 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.64□□□□□ -1.99
ATG4BQ9Y4P1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 Y_RNA.111-201ENST00000363248 100 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 SNORD21-201ENST00000383953 95 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL512633.1-201ENST00000399931 655 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 RNU2-36P-201ENST00000410361 191 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL592148.1-201ENST00000413568 445 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC009518.2-201ENST00000418056 731 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 ISCA1P1-201ENST00000426679 387 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC093106.2-201ENST00000428212 385 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 RPL12P25-201ENST00000455592 494 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 RPL26P9-201ENST00000457466 433 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 RPL36AP51-201ENST00000487216 318 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC128657.1-201ENST00000549459 145 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 NACAP3-201ENST00000552100 481 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 BNIP3P8-201ENST00000597863 560 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL670379.6-201ENST00000603753 252 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL670379.11-201ENST00000604059 253 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC008162.1-201ENST00000604718 254 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL670379.1-201ENST00000604752 252 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL670379.5-201ENST00000605253 252 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL670379.12-201ENST00000605291 253 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL670379.8-201ENST00000605353 252 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL670379.7-201ENST00000605823 252 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AC005046.1-201ENST00000608515 625 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL589994.2-201ENST00000621124 579 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 FRG1KP-201ENST00000623592 341 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 MIR3974-201ENST00000637126 96 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 U2.21-201ENST00000637295 81 ntBASIC2.63□□□□□ -1.99
ATG4BQ9Y4P1 AL365361.1-201ENST00000566942 3481 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 U3.4-201ENST00000363352 213 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 RPL26P27-201ENST00000414397 437 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 RAC1P6-201ENST00000423911 575 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC007283.2-201ENST00000424739 197 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AL589872.1-201ENST00000426602 288 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC009414.1-201ENST00000427200 443 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 SAR1AP4-201ENST00000429225 591 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 HMGB1P27-201ENST00000431429 603 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 GTF2IP20-201ENST00000431663 360 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 RPS24P13-201ENST00000442520 397 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 Z96811.1-201ENST00000445880 108 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 RPL31P41-201ENST00000477967 372 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 MTND1P3-201ENST00000484956 952 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC010587.1-201ENST00000505809 469 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC117522.3-201ENST00000507974 584 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC098799.2-201ENST00000509466 868 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC010486.3-201ENST00000511602 785 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 RNA5SP367-201ENST00000516557 118 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 RNA5SP471-201ENST00000516971 106 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AP003122.4-201ENST00000530980 758 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 RPL21P5-201ENST00000554662 472 ntBASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.62□□□□□ -1.99
ATG4BQ9Y4P1 MIR3605-201ENST00000583214 100 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms