Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 UBE2V1P2-201ENST00000397758 440 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.42□□□□□ -1.86
PKP3Q9Y446 RNA5SP118-201ENST00000410385 109 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 RNU4-46P-201ENST00000410818 138 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC126124.2-201ENST00000413542 321 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.42□□□□□ -1.86
PKP3Q9Y446 OR6C66P-201ENST00000414917 930 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 BTF3L4P3-201ENST00000418879 476 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.42□□□□□ -1.86
PKP3Q9Y446 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PKP3Q9Y446 RPL7P46-201ENST00000425129 740 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 HMGB1P12-201ENST00000438594 598 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 CBWD4P-201ENST00000445695 655 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC008264.1-201ENST00000447612 367 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 HMGN2P16-201ENST00000456802 261 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 SNRPFP3-201ENST00000457792 225 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC087588.1-201ENST00000462203 316 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.42□□□□□ -1.86
PKP3Q9Y446 EIF4EP3-201ENST00000498782 656 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC117522.3-201ENST00000507974 584 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC098591.2-201ENST00000510152 315 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC074344.1-201ENST00000512823 224 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 RNU4-29P-201ENST00000515943 174 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 RNU6-685P-201ENST00000517088 95 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC004024.1-201ENST00000549244 247 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.42□□□□□ -1.86
PKP3Q9Y446 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.42□□□□□ -1.86
PKP3Q9Y446 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.42□□□□□ -1.86
PKP3Q9Y446 MIR3922-201ENST00000585192 84 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 RMST_3.1-201ENST00000611651 109 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC024614.3-201ENST00000637860 256 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 AC103710.2-202ENST00000641454 2853 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PKP3Q9Y446 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PKP3Q9Y446 AL672296.1-201ENST00000427780 2158 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PKP3Q9Y446 ASNSP3-201ENST00000451989 1306 ntBASIC3.42□□□□□ -1.86
PKP3Q9Y446 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.42□□□□□ -1.86
PKP3Q9Y446 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 TPTE2P4-201ENST00000258589 1605 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKP3Q9Y446 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKP3Q9Y446 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PKP3Q9Y446 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 MIR493-201ENST00000385254 89 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 RNU6-550P-201ENST00000391057 101 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 RNU6-876P-201ENST00000391295 104 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 AL606923.1-201ENST00000406616 190 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 RPS12P24-201ENST00000412619 387 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 Z99755.1-201ENST00000414048 380 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC080125.1-201ENST00000414888 684 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC017079.2-201ENST00000416102 485 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 RPL30P16-201ENST00000419341 429 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 AP000907.1-201ENST00000428428 510 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 VN1R34P-201ENST00000447387 883 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 ELOCP23-201ENST00000452014 332 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 RPL21P8-201ENST00000465083 535 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 RPL38P4-201ENST00000502376 214 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 ATP5F1P5-201ENST00000526403 760 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC015917.1-201ENST00000579654 510 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 AL670379.4-201ENST00000605279 254 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC022893.3-201ENST00000607665 437 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 XIST_intron.1-201ENST00000619444 68 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC009033.1-201ENST00000624279 431 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PKP3Q9Y446 AC017071.1-201ENST00000564407 2204 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKP3Q9Y446 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKP3Q9Y446 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKP3Q9Y446 OR4G1P-203ENST00000641984 1631 ntBASIC3.41□□□□□ -1.86
PKP3Q9Y446 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PKP3Q9Y446 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PKP3Q9Y446 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.4□□□□□ -1.86
PKP3Q9Y446 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PKP3Q9Y446 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PKP3Q9Y446 RNY3P14-201ENST00000384309 102 ntBASIC3.4□□□□□ -1.87
PKP3Q9Y446 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PKP3Q9Y446 PTMAP5-201ENST00000393073 333 ntBASIC3.4□□□□□ -1.87
PKP3Q9Y446 CISD1P1-201ENST00000393907 327 ntBASIC3.4□□□□□ -1.87
PKP3Q9Y446 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.4□□□□□ -1.87
PKP3Q9Y446 RNU6-193P-201ENST00000410977 107 ntBASIC3.4□□□□□ -1.87
PKP3Q9Y446 RNU6-373P-201ENST00000411247 98 ntBASIC3.4□□□□□ -1.87
PKP3Q9Y446 RNA5SP111-201ENST00000411386 101 ntBASIC3.4□□□□□ -1.87
PKP3Q9Y446 AC009237.5-201ENST00000414271 501 ntBASIC3.4□□□□□ -1.87
PKP3Q9Y446 Z85995.1-201ENST00000415547 335 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms