Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 RNU6-278P-201ENST00000390945 109 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 RNA5SP212-201ENST00000391223 107 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AL359511.1-201ENST00000402970 211 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 RNU2-72P-201ENST00000411175 163 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 MTND2P29-201ENST00000438595 412 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AC005094.1-201ENST00000440420 368 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 RPL23AP76-201ENST00000441860 458 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 Z75741.1-201ENST00000446793 314 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 ANP32BP3-201ENST00000559213 706 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 VN1R83P-201ENST00000595685 445 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AL078605.1-201ENST00000603529 500 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 RNU6-1192P-201ENST00000612197 107 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AC108479.2-201ENST00000617314 601 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 RNU6-489P-201ENST00000618289 107 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AC013470.4-201ENST00000619978 986 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 RNU6-1284P-201ENST00000363701 100 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 SNORA54-201ENST00000384281 123 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 MIR200C-201ENST00000384980 68 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 MIR29C-201ENST00000385231 88 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 AL359704.1-201ENST00000411586 781 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 CACYBPP2-201ENST00000453625 678 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 USP9YP10-201ENST00000454868 628 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 RPF2P2-201ENST00000504693 896 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 SNORA74D-201ENST00000516404 141 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 RNU5B-3P-201ENST00000516601 115 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 MIR4429-201ENST00000580105 73 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 AC006270.3-201ENST00000605967 1036 ntBASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CHTOPQ9Y3Y2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 Y_RNA.311-201ENST00000365068 96 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 MIR19A-201ENST00000384878 82 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AL133475.1-201ENST00000404414 305 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 OR51A5P-201ENST00000415429 942 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AC245102.2-201ENST00000448956 180 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AC012308.1-201ENST00000451232 178 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AC108729.1-201ENST00000487812 947 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 MTCYBP43-201ENST00000513621 740 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 SNORA31.3-201ENST00000516029 96 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 RNU6-586P-201ENST00000517265 104 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AC009812.2-201ENST00000517657 457 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 OR5B19P-201ENST00000531766 928 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 BNIP3P9-201ENST00000603714 553 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 SEPT7P9-203ENST00000604116 343 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 ELOCP5-201ENST00000604924 333 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AC099842.1-201ENST00000619919 596 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AP003476.1-201ENST00000623984 516 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 AC099654.9-201ENST00000637055 678 ntBASIC1.84□□□□□ -2.11
CHTOPQ9Y3Y2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
CHTOPQ9Y3Y2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CHTOPQ9Y3Y2 MTCO1P12-201ENST00000414273 1543 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 SNORA71.3-201ENST00000362582 128 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 SNORD114-19-201ENST00000363072 75 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 Y_RNA.110-201ENST00000363220 99 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 U3.19-201ENST00000390893 196 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 RNA5SP465-201ENST00000391195 109 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AL591034.2-201ENST00000402839 359 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 RPS3AP25-201ENST00000411660 793 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms