Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 HMGB3P12-201ENST00000438745 556 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AL121769.1-201ENST00000469473 401 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AC002456.2-201ENST00000509356 380 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AC116347.2-201ENST00000514912 523 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 RNU6-678P-201ENST00000516832 109 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AP003122.3-201ENST00000526316 255 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AC084851.1-201ENST00000529105 249 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 ARL2BPP2-201ENST00000550907 489 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AC091152.3-201ENST00000604227 325 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AP000860.1-201ENST00000605250 559 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 MIR7157-201ENST00000635801 60 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 U6.105-201ENST00000637379 88 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 AC104454.1-201ENST00000421341 1401 ntBASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.15□□□□□ -2.07
KCNIP3Q9Y2W7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AL596028.1-201ENST00000326971 197 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 MIR422A-201ENST00000362286 90 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 RNU6-500P-201ENST00000362349 107 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 U8.8-201ENST00000365399 135 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 SMIM11P1-201ENST00000369586 178 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 RNU6-809P-201ENST00000384461 107 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AL138827.1-201ENST00000402666 306 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 RNU2-36P-201ENST00000410361 191 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AF274854.1-201ENST00000413236 615 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 RPLP0P7-201ENST00000416050 667 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AL592045.1-201ENST00000429867 352 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC091390.1-201ENST00000433904 331 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 PGBD4P3-201ENST00000440731 581 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AL161651.1-201ENST00000440882 223 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 BRK1P2-201ENST00000442875 223 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC118469.1-201ENST00000442943 488 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AL513328.1-201ENST00000446460 224 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 RNU7-26P-201ENST00000458980 63 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 RN7SKP265-201ENST00000516448 223 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC022616.6-201ENST00000520479 119 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC107934.1-201ENST00000522215 217 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 ELOCP32-201ENST00000548625 324 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC091489.2-201ENST00000566263 604 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC135628.1-201ENST00000568867 534 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 MIR4658-201ENST00000584344 65 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC073544.2-201ENST00000601155 540 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC007938.3-201ENST00000604965 623 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC103710.2-201ENST00000609912 942 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 HMGB1P24-202ENST00000615653 685 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 FRG1KP-201ENST00000623592 341 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC007671.2-201ENST00000637344 619 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 MTND5P42-201ENST00000637720 498 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AC092104.1-201ENST00000497346 1441 ntBASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
KCNIP3Q9Y2W7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 RNA5SP72-201ENST00000364442 117 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 SNORA9-201ENST00000384215 133 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 MIR449B-201ENST00000384995 97 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 SNORD115.1-201ENST00000391109 76 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 RNA5SP21-201ENST00000410917 96 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 RPS12P24-201ENST00000412619 387 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 MTCO3P30-201ENST00000426425 670 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 EEF1B2P7-201ENST00000451177 676 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 MTND1P12-201ENST00000455231 147 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 RNU6-953P-201ENST00000459154 107 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 MTND1P3-201ENST00000484956 952 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 GZMAP1-201ENST00000503054 631 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms