Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 AP001804.3-201ENST00000525146 880 ntBASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 AC004024.1-201ENST00000549244 247 ntBASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 AC090132.2-201ENST00000615881 347 ntBASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 AC002546.1-201ENST00000588041 2504 ntBASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 AC007656.2-201ENST00000624902 4547 ntBASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 TPTE2P4-201ENST00000258589 1605 ntBASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
DTX4Q9Y2E6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AL079305.1-201ENST00000623159 3008 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC103710.2-202ENST00000641454 2853 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC007823.1-201ENST00000569932 1566 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 UBE2L2-201ENST00000254302 429 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 Y_RNA.11-201ENST00000362375 109 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 Y_RNA.86-201ENST00000363020 111 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 RNU4-66P-201ENST00000365199 138 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 MIR493-201ENST00000385254 89 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 RNU6-332P-201ENST00000391193 108 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 CISD1P1-201ENST00000393907 327 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AL139397.2-201ENST00000404529 772 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 RNU4-46P-201ENST00000410818 138 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 RNU6-193P-201ENST00000410977 107 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 RPS15AP6-201ENST00000420703 385 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AL590383.1-201ENST00000428602 75 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 RPL36AP53-201ENST00000432891 316 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 CBWD4P-201ENST00000445695 655 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 MTND1P11-201ENST00000456661 876 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 RPL39P36-201ENST00000490784 156 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 RNU1-61P-201ENST00000516107 151 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 RN7SKP83-201ENST00000516512 178 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 MTND4P7-201ENST00000523876 130 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 CENPUP1-201ENST00000526649 1202 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AL353621.2-201ENST00000605340 133 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AC006504.8-201ENST00000621046 635 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 AP003122.6-201ENST00000623831 495 ntBASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.39□□□□□ -1.87
DTX4Q9Y2E6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AC007496.3-201ENST00000624987 3443 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 Y_RNA.61-201ENST00000362835 102 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 MIR184-201ENST00000384962 84 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 RPL21P17-201ENST00000397467 475 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 SYF2P2-201ENST00000417620 583 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 BX842559.1-201ENST00000419615 532 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AL035423.1-201ENST00000420331 213 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AL513185.2-201ENST00000425543 193 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AL451062.2-201ENST00000427515 271 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 MTND4LP16-201ENST00000440828 295 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 PMCHL2-203ENST00000457791 237 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 RNU7-180P-201ENST00000459240 63 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AP002884.2-201ENST00000471647 395 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 RPL21P99-201ENST00000480369 423 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 HMGN1P12-201ENST00000499125 195 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 PSMA2P1-201ENST00000526365 646 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 RAB11AP2-201ENST00000545905 639 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 C8orf59P2-201ENST00000603441 271 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms