Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 SNRPEP10-201ENST00000420249 274 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 GTF2IP20-201ENST00000431663 360 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 HMGB1P12-201ENST00000438594 598 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 CALM1P1-201ENST00000442082 433 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 FDX1P2-201ENST00000450769 375 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 PMCHL2-203ENST00000457791 237 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC008481.1-201ENST00000463278 396 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AL049714.1-201ENST00000466686 347 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC108860.1-201ENST00000484521 383 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 LRRC34P2-201ENST00000514850 553 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 RNA5SP337-201ENST00000517007 109 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 RNU6-64P-201ENST00000517119 105 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC009812.2-201ENST00000517657 457 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AP006245.1-201ENST00000522549 120 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC008489.1-201ENST00000524271 483 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 CENPUP1-201ENST00000526649 1202 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 GLYCAM1-201ENST00000546596 285 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC128657.1-201ENST00000549459 145 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 MED28P6-201ENST00000558776 231 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC105224.1-201ENST00000587055 421 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC006557.5-201ENST00000603126 811 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC010338.1-201ENST00000621823 717 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AC048347.1-201ENST00000624621 427 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AP003400.5-201ENST00000624827 617 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 AL359697.1-201ENST00000624879 587 ntBASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
SCAF8Q9UPN6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
SCAF8Q9UPN6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SCAF8Q9UPN6 CEP170P1-201ENST00000502249 4587 ntBASIC3.9□□□□□ -1.78
SCAF8Q9UPN6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.9□□□□□ -1.78
SCAF8Q9UPN6 HSPE1P11-201ENST00000339579 310 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 Y_RNA.279-201ENST00000364763 95 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 RNU6-7-201ENST00000364784 107 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 RNU6-8-201ENST00000365467 107 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 Y_RNA.381-201ENST00000365666 102 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AC068050.1-201ENST00000394891 380 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AC110754.1-201ENST00000399740 601 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 RPS4XP8-201ENST00000402039 771 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 RPL21P109-201ENST00000422213 475 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AC079780.1-201ENST00000428259 207 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 HSPE1P6-201ENST00000479457 291 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 RPL23AP55-201ENST00000498163 452 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 MTCO2P30-201ENST00000503662 364 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 MTND3P22-201ENST00000510932 243 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AC093012.1-202ENST00000549403 582 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AF038458.1-201ENST00000588406 262 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AP001330.4-201ENST00000604350 154 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AC009161.2-201ENST00000624626 138 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AL137003.2-201ENST00000606924 2538 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 AC068647.1-201ENST00000489539 2265 ntBASIC3.9□□□□□ -1.79
SCAF8Q9UPN6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 RNY3P3-201ENST00000363816 102 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 RNU6-169P-201ENST00000365336 107 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC007390.1-201ENST00000415722 356 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC007283.2-201ENST00000424739 197 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 MTND1P14-201ENST00000427400 950 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AL356867.1-201ENST00000429623 299 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AF228730.2-201ENST00000438784 848 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC107083.1-201ENST00000439643 279 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 SNRPGP3-201ENST00000469405 227 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC083798.1-201ENST00000472671 131 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 RNU6-1220P-201ENST00000517126 108 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC022616.3-201ENST00000523940 148 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC123904.3-201ENST00000547218 814 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC034105.3-201ENST00000565294 442 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 RPL12P50-201ENST00000603116 116 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AL136363.1-201ENST00000605349 337 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 BNIP3P10-201ENST00000605360 577 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC016727.1-205ENST00000605437 569 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 YWHAEP7-203ENST00000622054 312 ntBASIC3.89□□□□□ -1.79
SCAF8Q9UPN6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms