Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 SRI-210ENST00000490437 570 ntTSL 2 BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 RNU2-10P-201ENST00000516375 211 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 RNU6-548P-201ENST00000517083 115 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC121247.2-201ENST00000604776 136 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC239868.4-201ENST00000608318 671 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC090115.4-201ENST00000609970 188 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 BX664608.1-201ENST00000610519 487 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 PISRT1-201ENST00000626175 531 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 SNORD114-1-201ENST00000362705 72 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 MIR181B1-201ENST00000385240 110 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 Z98742.3-201ENST00000418637 326 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 Z82210.1-201ENST00000440037 231 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC010099.1-201ENST00000455434 375 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 SNORD97-201ENST00000459187 142 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 RN7SKP258-201ENST00000517151 304 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC107934.1-201ENST00000522215 217 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 MTND2P38-201ENST00000522536 667 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 MIR4293-201ENST00000584305 78 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 UBE2Q2P6-201ENST00000612666 153 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 uc_338.12-201ENST00000616344 181 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC010338.1-201ENST00000621823 717 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC025048.6-202ENST00000627667 438 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5□□□□□ -1.61
SHROOM4Q9ULL8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AC022336.2-201ENST00000568966 2538 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AC091564.4-201ENST00000533934 2194 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 RPL9P7-201ENST00000330965 580 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AL079342.1-201ENST00000401460 267 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AL359634.1-202ENST00000404721 284 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 USP9YP13-201ENST00000417797 480 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 HSPE1P1-201ENST00000421494 318 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 TRIM60P18-201ENST00000441518 828 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 MIR4635-201ENST00000583759 79 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AC012065.4-201ENST00000602445 679 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AC138749.5-201ENST00000611461 208 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AC116165.2-201ENST00000616705 206 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AC108479.2-201ENST00000617314 601 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 AC110774.1-201ENST00000623567 2018 ntBASIC4.99□□□□□ -1.61
SHROOM4Q9ULL8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 SSXP1-201ENST00000453640 473 ntBASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 RPL37P6-201ENST00000460682 294 ntBASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 LARP1BP2-201ENST00000486594 519 ntBASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 FABP5P5-201ENST00000515537 406 ntBASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 RNU6-927P-201ENST00000516199 100 ntBASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 AC011979.2-201ENST00000527568 352 ntBASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 AMZ2P1-203ENST00000565833 850 ntBASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 AC068276.1-201ENST00000605793 379 ntBASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM4Q9ULL8 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 RNA5SP252-201ENST00000391131 119 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 RNU2-8P-201ENST00000410727 190 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 HMGB1P27-201ENST00000431429 603 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AC013267.1-201ENST00000458227 267 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AC087588.1-201ENST00000462203 316 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 RNU6-928P-201ENST00000516876 104 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AL670379.6-201ENST00000603753 252 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AL670379.11-201ENST00000604059 253 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AC008162.1-201ENST00000604718 254 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AL670379.1-201ENST00000604752 252 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AL670379.5-201ENST00000605253 252 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AL670379.12-201ENST00000605291 253 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AL670379.8-201ENST00000605353 252 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AL670379.7-201ENST00000605823 252 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AL391813.2-201ENST00000609113 322 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AC034102.8-201ENST00000615146 484 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 AC104010.1-201ENST00000616889 150 ntBASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM4Q9ULL8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHROOM4Q9ULL8 EI24P2-201ENST00000397776 1076 ntBASIC4.96□□□□□ -1.62
SHROOM4Q9ULL8 CYCSP46-201ENST00000423569 204 ntBASIC4.96□□□□□ -1.62
SHROOM4Q9ULL8 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.96□□□□□ -1.62
SHROOM4Q9ULL8 BNIP3P2-201ENST00000441221 577 ntBASIC4.96□□□□□ -1.62
SHROOM4Q9ULL8 AC092436.1-201ENST00000506450 503 ntBASIC4.96□□□□□ -1.62
SHROOM4Q9ULL8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms