Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 UBE2FP1-201ENST00000416536 447 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AC093716.1-201ENST00000435923 377 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AC234064.1-201ENST00000436312 247 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.08□□□□□ -2.24
SCN11AQ9UI33 JTBP1-201ENST00000441314 247 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.08□□□□□ -2.24
SCN11AQ9UI33 MTND4LP24-201ENST00000572277 291 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 MIR6513-201ENST00000621188 64 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AC009541.1-201ENST00000438279 2662 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
SCN11AQ9UI33 RNU2-21P-201ENST00000410368 188 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.08□□□□□ -2.24
SCN11AQ9UI33 EIF4EP4-201ENST00000424916 578 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AL353718.1-201ENST00000451028 517 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AC104806.1-201ENST00000508720 308 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AC008676.3-201ENST00000521237 435 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 NIFKP8-201ENST00000560500 874 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AC087465.1-201ENST00000560574 245 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AC021749.1-201ENST00000604322 607 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AL592148.2-201ENST00000612210 372 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 AL133370.2-201ENST00000619934 439 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SCN11AQ9UI33 RNA5SP391-201ENST00000363456 119 ntBASIC1.07□□□□□ -2.24
SCN11AQ9UI33 SNORD114-2-201ENST00000363953 78 ntBASIC1.07□□□□□ -2.24
SCN11AQ9UI33 OR9R1P-201ENST00000412200 877 ntBASIC1.07□□□□□ -2.24
SCN11AQ9UI33 AL022238.1-201ENST00000442557 355 ntBASIC1.07□□□□□ -2.24
SCN11AQ9UI33 RPS15AP27-201ENST00000449183 343 ntBASIC1.07□□□□□ -2.24
SCN11AQ9UI33 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SCN11AQ9UI33 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.07□□□□□ -2.24
SCN11AQ9UI33 MRPS36P2-201ENST00000512569 299 ntBASIC1.07□□□□□ -2.24
SCN11AQ9UI33 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.07□□□□□ -2.24
SCN11AQ9UI33 AC036111.3-201ENST00000526389 112 ntBASIC1.07□□□□□ -2.24
SCN11AQ9UI33 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.07□□□□□ -2.24
SCN11AQ9UI33 MIR8087-201ENST00000612745 78 ntBASIC1.07□□□□□ -2.24
SCN11AQ9UI33 AL773524.1-201ENST00000614065 229 ntBASIC1.07□□□□□ -2.24
SCN11AQ9UI33 AC015726.3-201ENST00000624501 418 ntBASIC1.07□□□□□ -2.24
SCN11AQ9UI33 MIR924-201ENST00000638017 53 ntBASIC1.07□□□□□ -2.24
SCN11AQ9UI33 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AC096920.1-201ENST00000423991 241 ntBASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AC098862.1-201ENST00000504991 413 ntBASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AC118273.2-201ENST00000532092 465 ntBASIC1.06□□□□□ -2.24
SCN11AQ9UI33 MIR6864-201ENST00000617935 70 ntBASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AC244453.4-201ENST00000419150 388 ntBASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AC246680.2-201ENST00000422106 389 ntBASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AL358176.2-201ENST00000425769 204 ntBASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AC244035.1-201ENST00000430042 390 ntBASIC1.06□□□□□ -2.24
SCN11AQ9UI33 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AC084033.1-201ENST00000550830 633 ntBASIC1.06□□□□□ -2.24
SCN11AQ9UI33 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.06□□□□□ -2.24
SCN11AQ9UI33 MIR2909-201ENST00000617113 69 ntBASIC1.06□□□□□ -2.24
SCN11AQ9UI33 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.05□□□□□ -2.24
SCN11AQ9UI33 SNORD26-201ENST00000384147 75 ntBASIC1.05□□□□□ -2.24
SCN11AQ9UI33 AL031663.1-201ENST00000437445 219 ntBASIC1.05□□□□□ -2.24
SCN11AQ9UI33 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.05□□□□□ -2.24
SCN11AQ9UI33 snoU109.1-201ENST00000459339 135 ntBASIC1.05□□□□□ -2.24
SCN11AQ9UI33 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.05□□□□□ -2.24
SCN11AQ9UI33 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.05□□□□□ -2.24
SCN11AQ9UI33 AL109933.3-201ENST00000619095 188 ntBASIC1.05□□□□□ -2.24
SCN11AQ9UI33 MTND4P31-201ENST00000425607 1343 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 DEFB108F-201ENST00000344638 222 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 RNA5SP276-201ENST00000362580 94 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SCN11AQ9UI33 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SCN11AQ9UI33 RPL30P13-201ENST00000418873 348 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.04□□□□□ -2.24
SCN11AQ9UI33 AC016691.1-201ENST00000441321 413 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 AC079776.3-201ENST00000450665 370 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.04□□□□□ -2.24
SCN11AQ9UI33 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.04□□□□□ -2.24
SCN11AQ9UI33 MTND2P26-201ENST00000528255 1029 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.04□□□□□ -2.24
SCN11AQ9UI33 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.04□□□□□ -2.24
SCN11AQ9UI33 AC107954.1-201ENST00000565906 727 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 AL118508.4-201ENST00000624142 1176 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 MIR7515-201ENST00000637837 67 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 SDAD1P2-201ENST00000441308 2028 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 HAUS6P2-201ENST00000433254 2404 ntBASIC1.04□□□□□ -2.24
SCN11AQ9UI33 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.04□□□□□ -2.24
SCN11AQ9UI33 RNU1-72P-201ENST00000362976 153 ntBASIC1.03□□□□□ -2.24
SCN11AQ9UI33 RNU6-670P-201ENST00000364312 104 ntBASIC1.03□□□□□ -2.24
SCN11AQ9UI33 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.03□□□□□ -2.24
SCN11AQ9UI33 TPT1P8-201ENST00000510120 555 ntBASIC1.03□□□□□ -2.24
SCN11AQ9UI33 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.03□□□□□ -2.24
SCN11AQ9UI33 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.03□□□□□ -2.24
SCN11AQ9UI33 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms