Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
USP35Q9P2H5 MTHFD2P2-201ENST00000407725 247 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 RNU2-9P-201ENST00000410194 145 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 AC099548.1-201ENST00000421443 426 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.79□□□□□ -1.64
USP35Q9P2H5 HIGD1AP11-201ENST00000438361 280 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 ATP5C1P1-201ENST00000441945 895 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.79□□□□□ -1.64
USP35Q9P2H5 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.79□□□□□ -1.64
USP35Q9P2H5 SRRM1P2-201ENST00000464531 1192 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.79□□□□□ -1.64
USP35Q9P2H5 RNU6-123P-201ENST00000516163 102 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 RNA5SP165-201ENST00000517142 115 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.79□□□□□ -1.64
USP35Q9P2H5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.79□□□□□ -1.64
USP35Q9P2H5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
USP35Q9P2H5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.79□□□□□ -1.64
USP35Q9P2H5 AL451007.1-201ENST00000595491 289 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 MIR15A-201ENST00000607334 83 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 DUSP12P1-201ENST00000612874 516 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 U4.5-201ENST00000617137 123 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 AC099506.2-201ENST00000623074 221 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 AC139792.3-201ENST00000623525 224 ntBASIC4.79□□□□□ -1.64
USP35Q9P2H5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP35Q9P2H5 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP35Q9P2H5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.78□□□□□ -1.64
USP35Q9P2H5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP35Q9P2H5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP35Q9P2H5 Y_RNA.6-201ENST00000362350 114 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 Y_RNA.576-201ENST00000384781 102 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 AL353193.1-201ENST00000421444 268 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.78□□□□□ -1.64
USP35Q9P2H5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.78□□□□□ -1.64
USP35Q9P2H5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.78□□□□□ -1.64
USP35Q9P2H5 OR2B8P-201ENST00000432841 938 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 RPL36AP53-201ENST00000432891 316 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.78□□□□□ -1.64
USP35Q9P2H5 AC092798.1-201ENST00000458542 409 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.78□□□□□ -1.64
USP35Q9P2H5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.78□□□□□ -1.64
USP35Q9P2H5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP35Q9P2H5 RNA5SP503-201ENST00000517047 117 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 AP003122.3-201ENST00000526316 255 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 AC084851.1-201ENST00000529105 249 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 AL512310.1-201ENST00000548639 172 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.78□□□□□ -1.64
USP35Q9P2H5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.78□□□□□ -1.64
USP35Q9P2H5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
USP35Q9P2H5 MIR4325-201ENST00000583049 90 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.78□□□□□ -1.64
USP35Q9P2H5 CR381653.2-201ENST00000624041 768 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 AL512643.1-201ENST00000635735 524 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 Z99571.1-201ENST00000636677 394 ntBASIC4.78□□□□□ -1.64
USP35Q9P2H5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP35Q9P2H5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP35Q9P2H5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP35Q9P2H5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP35Q9P2H5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP35Q9P2H5 RNU6-1085P-201ENST00000363576 107 ntBASIC4.77□□□□□ -1.65
USP35Q9P2H5 RNU6-1322P-201ENST00000364309 107 ntBASIC4.77□□□□□ -1.65
USP35Q9P2H5 Y_RNA.516-201ENST00000384541 124 ntBASIC4.77□□□□□ -1.65
USP35Q9P2H5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP35Q9P2H5 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.77□□□□□ -1.65
USP35Q9P2H5 COTL1P1-201ENST00000422309 375 ntBASIC4.77□□□□□ -1.65
USP35Q9P2H5 AC093392.2-201ENST00000450682 337 ntBASIC4.77□□□□□ -1.65
USP35Q9P2H5 AC027673.1-201ENST00000456245 405 ntBASIC4.77□□□□□ -1.65
USP35Q9P2H5 AC026801.1-201ENST00000497178 464 ntBASIC4.77□□□□□ -1.65
USP35Q9P2H5 AC019235.1-201ENST00000503847 207 ntBASIC4.77□□□□□ -1.65
USP35Q9P2H5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.77□□□□□ -1.65
USP35Q9P2H5 RNU6-1315P-201ENST00000517187 99 ntBASIC4.77□□□□□ -1.65
USP35Q9P2H5 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.77□□□□□ -1.65
USP35Q9P2H5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.77□□□□□ -1.65
USP35Q9P2H5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
USP35Q9P2H5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.77□□□□□ -1.65
USP35Q9P2H5 AL162274.2-201ENST00000614406 332 ntBASIC4.77□□□□□ -1.65
USP35Q9P2H5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.77□□□□□ -1.65
USP35Q9P2H5 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.77□□□□□ -1.65
USP35Q9P2H5 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.77□□□□□ -1.65
USP35Q9P2H5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP35Q9P2H5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP35Q9P2H5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP35Q9P2H5 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP35Q9P2H5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP35Q9P2H5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
USP35Q9P2H5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP35Q9P2H5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USP35Q9P2H5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP35Q9P2H5 AC058791.1-201ENST00000608412 3198 ntBASIC4.76□□□□□ -1.65
USP35Q9P2H5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP35Q9P2H5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP35Q9P2H5 RNA5SP252-201ENST00000391131 119 ntBASIC4.76□□□□□ -1.65
USP35Q9P2H5 UBE2V1P10-201ENST00000414685 269 ntBASIC4.76□□□□□ -1.65
USP35Q9P2H5 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.76□□□□□ -1.65
USP35Q9P2H5 AL596276.1-201ENST00000434465 418 ntBASIC4.76□□□□□ -1.65
USP35Q9P2H5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.76□□□□□ -1.65
USP35Q9P2H5 ELOCP23-201ENST00000452014 332 ntBASIC4.76□□□□□ -1.65
USP35Q9P2H5 AC006539.3-201ENST00000454258 129 ntBASIC4.76□□□□□ -1.65
USP35Q9P2H5 RNU7-63P-201ENST00000459054 62 ntBASIC4.76□□□□□ -1.65
USP35Q9P2H5 snoU13.28-201ENST00000459235 104 ntBASIC4.76□□□□□ -1.65
USP35Q9P2H5 AC104806.1-201ENST00000508720 308 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms