Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 RNU6-552P-201ENST00000362869 119 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 RNA5SP374-201ENST00000362939 125 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 RNU6-741P-201ENST00000383889 107 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 SNORA48.2-201ENST00000390926 124 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 RNU6-903P-201ENST00000391270 109 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 FGF7P8-201ENST00000402994 292 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 MIR1183-201ENST00000408856 89 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 RPS12P24-201ENST00000412619 387 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL20A1Q9P218 RPL30P2-201ENST00000414021 291 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 RPL7P46-201ENST00000425129 740 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 AC091390.3-201ENST00000426478 338 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 AL353572.1-201ENST00000442490 417 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 AL162395.1-201ENST00000457882 422 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 RPL21P8-201ENST00000465083 535 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 AL160314.1-201ENST00000490836 438 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 RPL38P4-201ENST00000502376 214 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 AC092436.1-201ENST00000506450 503 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 RNU1-61P-201ENST00000516107 151 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 RNU6-123P-201ENST00000516163 102 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 RNU6-358P-201ENST00000516564 75 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 RNU6-685P-201ENST00000517088 95 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 AC004024.1-201ENST00000549244 247 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 AC007424.1-203ENST00000554613 687 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 AC008521.1-201ENST00000587471 187 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 AC090132.2-201ENST00000615881 347 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 U6.42-201ENST00000618440 107 ntBASIC3.8□□□□□ -1.8
COL20A1Q9P218 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL20A1Q9P218 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL20A1Q9P218 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL20A1Q9P218 MIR423-201ENST00000362201 94 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 RNU6-451P-201ENST00000362921 107 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 RNU6-288P-201ENST00000363690 104 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 SNORA38.1-201ENST00000364172 131 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 OR9R1P-201ENST00000412200 877 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC002075.2-201ENST00000425207 252 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 TAAR7P-201ENST00000436141 242 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 HMGB1P31-201ENST00000437242 427 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 MTATP6P23-201ENST00000440153 476 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 MTND4P18-201ENST00000447010 465 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 RPL23AP11-201ENST00000475260 469 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 RPS29P25-201ENST00000481709 171 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC117522.3-201ENST00000507974 584 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC098591.2-201ENST00000510152 315 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 RNU4-29P-201ENST00000515943 174 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 RNU6-143P-201ENST00000516942 93 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 AP005435.4-201ENST00000529514 284 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 HIF1AP1-201ENST00000553642 175 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 BNIP3P9-201ENST00000603714 553 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 AL670379.4-201ENST00000605279 254 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC005000.2-201ENST00000605468 310 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC022893.3-201ENST00000607665 437 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC099654.14-201ENST00000638599 341 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 TPTE2P4-201ENST00000258589 1605 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 TNPO1P3-201ENST00000436471 2662 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.79□□□□□ -1.8
COL20A1Q9P218 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL20A1Q9P218 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.79□□□□□ -1.8
COL20A1Q9P218 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL20A1Q9P218 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.78□□□□□ -1.8
COL20A1Q9P218 UBE2L2-201ENST00000254302 429 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 RPL7P26-201ENST00000333817 754 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 RNU6-1167P-201ENST00000363227 94 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL20A1Q9P218 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COL20A1Q9P218 MIR128-1-201ENST00000384921 82 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 MIR493-201ENST00000385254 89 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 AL606923.1-201ENST00000406616 190 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 RNU6-1068P-201ENST00000410958 103 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 RNU6-193P-201ENST00000410977 107 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 RNA5SP111-201ENST00000411386 101 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 BTF3L4P3-201ENST00000418879 476 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms