Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC079804.2-201ENST00000490376 200 ntBASIC2.55□□□□□ -2
HOXC10Q9NYD6 AC114786.4-201ENST00000508771 728 ntBASIC2.55□□□□□ -2
HOXC10Q9NYD6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.55□□□□□ -2
HOXC10Q9NYD6 AC114797.1-201ENST00000514003 728 ntBASIC2.55□□□□□ -2
HOXC10Q9NYD6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.55□□□□□ -2
HOXC10Q9NYD6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
HOXC10Q9NYD6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.55□□□□□ -2
HOXC10Q9NYD6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.55□□□□□ -2
HOXC10Q9NYD6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.55□□□□□ -2
HOXC10Q9NYD6 AC124947.2-202ENST00000552735 133 ntBASIC2.55□□□□□ -2
HOXC10Q9NYD6 AC136618.2-201ENST00000575091 400 ntBASIC2.55□□□□□ -2
HOXC10Q9NYD6 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
HOXC10Q9NYD6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.55□□□□□ -2
HOXC10Q9NYD6 BNIP3P10-201ENST00000605360 577 ntBASIC2.55□□□□□ -2
HOXC10Q9NYD6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HOXC10Q9NYD6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HOXC10Q9NYD6 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.55□□□□□ -2
HOXC10Q9NYD6 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.55□□□□□ -2
HOXC10Q9NYD6 AC009831.4-201ENST00000620744 325 ntBASIC2.55□□□□□ -2
HOXC10Q9NYD6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.55□□□□□ -2
HOXC10Q9NYD6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
HOXC10Q9NYD6 AC006927.4-201ENST00000639187 543 ntBASIC2.55□□□□□ -2
HOXC10Q9NYD6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.54□□□□□ -2
HOXC10Q9NYD6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
HOXC10Q9NYD6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.54□□□□□ -2
HOXC10Q9NYD6 U8.8-201ENST00000365399 135 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
HOXC10Q9NYD6 AL590084.2-201ENST00000401481 382 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 AL356421.1-201ENST00000403255 413 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.54□□□□□ -2
HOXC10Q9NYD6 EIF4EP4-201ENST00000424916 578 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 USP12PX-201ENST00000432383 1057 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.54□□□□□ -2
HOXC10Q9NYD6 PSPHP1-201ENST00000450062 261 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.54□□□□□ -2
HOXC10Q9NYD6 AC093809.1-201ENST00000509155 340 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 AC105185.1-201ENST00000518705 535 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.54□□□□□ -2
HOXC10Q9NYD6 AP003467.2-201ENST00000520175 319 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.54□□□□□ -2
HOXC10Q9NYD6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.54□□□□□ -2
HOXC10Q9NYD6 AGGF1P5-201ENST00000567900 919 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.54□□□□□ -2
HOXC10Q9NYD6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.54□□□□□ -2
HOXC10Q9NYD6 NRBF2P1-201ENST00000587407 859 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 VN1R82P-201ENST00000601481 356 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 AC107214.2-201ENST00000608204 634 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 AC016597.2-201ENST00000613256 341 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 AL603758.1-201ENST00000618654 241 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 AC241585.2-209ENST00000638217 143 ntBASIC2.54□□□□□ -2
HOXC10Q9NYD6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
HOXC10Q9NYD6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.53□□□□□ -2
HOXC10Q9NYD6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.53□□□□□ -2
HOXC10Q9NYD6 RNU6-223P-201ENST00000362830 107 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 PIGPP2-201ENST00000411569 458 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.53□□□□□ -2
HOXC10Q9NYD6 BX119904.4-201ENST00000424402 301 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 AC092047.1-201ENST00000424997 240 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.53□□□□□ -2
HOXC10Q9NYD6 PTENP1-201ENST00000447117 1215 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.53□□□□□ -2
HOXC10Q9NYD6 MTND2P24-201ENST00000453434 806 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 ATG12P2-201ENST00000456830 416 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 HMGB1P36-201ENST00000487709 576 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 MIR514B-201ENST00000516774 80 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 AP005902.1-201ENST00000521358 186 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.53□□□□□ -2
HOXC10Q9NYD6 AP002748.2-201ENST00000528671 348 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 MTND4P33-201ENST00000556706 766 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.53□□□□□ -2
HOXC10Q9NYD6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.53□□□□□ -2
HOXC10Q9NYD6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.53□□□□□ -2
HOXC10Q9NYD6 AC011458.1-201ENST00000604034 617 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 AC025588.2-201ENST00000604851 466 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 AC144521.1-201ENST00000607148 956 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.53□□□□□ -2
HOXC10Q9NYD6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.53□□□□□ -2
HOXC10Q9NYD6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.53□□□□□ -2
HOXC10Q9NYD6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.53□□□□□ -2
HOXC10Q9NYD6 AC007785.2-201ENST00000598627 1916 ntBASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 SNORA48.3-201ENST00000391081 134 ntBASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 SNORD23.1-201ENST00000408212 104 ntBASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 RSU1P2-202ENST00000437884 485 ntBASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 AL049734.2-201ENST00000441066 616 ntBASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 DDX3P2-201ENST00000446138 111 ntBASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 TRBV1-201ENST00000476502 284 ntBASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 AC068587.2-201ENST00000478386 781 ntBASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 AC138853.1-201ENST00000503549 823 ntBASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 AC108210.2-201ENST00000503681 201 ntBASIC2.52□□□□□ -2.01
HOXC10Q9NYD6 SUMO2P6-201ENST00000505273 288 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms