Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MTND5P9-201ENST00000503854 1755 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSU72Q9NP77 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SSU72Q9NP77 AC010733.2-201ENST00000589496 5702 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 CPHL1P-201ENST00000461341 3407 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 Y_RNA.33-201ENST00000362591 102 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 RN7SKP95-201ENST00000362860 303 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 RNU6-1167P-201ENST00000363227 94 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 SNORD27-201ENST00000363981 72 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 MIR513A2-201ENST00000385249 127 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SSU72Q9NP77 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.5□□□□□ -1.69
SSU72Q9NP77 AC007098.1-201ENST00000420122 367 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 AL589765.3-201ENST00000446084 462 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 AC010469.2-201ENST00000496412 480 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 AC074250.1-201ENST00000511117 192 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 AC007016.1-201ENST00000512110 244 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 RNU4-60P-201ENST00000517239 135 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSU72Q9NP77 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.5□□□□□ -1.69
SSU72Q9NP77 HMGB1P14-201ENST00000557424 591 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
SSU72Q9NP77 AC009314.1-201ENST00000603871 304 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 AC008962.1-201ENST00000605729 304 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SSU72Q9NP77 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSU72Q9NP77 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSU72Q9NP77 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
SSU72Q9NP77 OR14L1P-202ENST00000641545 3009 ntBASIC4.5□□□□□ -1.69
SSU72Q9NP77 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SSU72Q9NP77 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSU72Q9NP77 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSU72Q9NP77 AC090971.4-201ENST00000560291 1800 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 A2MP1-204ENST00000566278 4130 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSU72Q9NP77 Y_RNA.237-201ENST00000364439 102 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 RNU6-827P-201ENST00000365553 106 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 RNU6-395P-201ENST00000365662 106 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 RNU6-1074P-201ENST00000383995 104 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 MIR521-1-201ENST00000384902 87 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 MIR223-201ENST00000385204 110 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 AL645733.1-201ENST00000402250 217 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 AC004552.1-201ENST00000419089 348 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 ABCF2P2-201ENST00000450549 296 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 AC079354.2-201ENST00000453523 154 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 PRELID3BP1-201ENST00000457142 540 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 RPS26P3-201ENST00000470205 348 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 AC090543.2-201ENST00000483963 348 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 AC004057.1-201ENST00000485827 348 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 AL671862.1-201ENST00000515851 349 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 RNU5B-3P-201ENST00000516601 115 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 RNU6-182P-201ENST00000516970 105 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 SNORA81.3-201ENST00000517283 198 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 AC007458.1-201ENST00000542812 373 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 AL355877.2-201ENST00000603670 358 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 MIR432-201ENST00000606207 94 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 MIR8076-201ENST00000611401 83 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 MIR4727-201ENST00000622232 55 ntBASIC4.49□□□□□ -1.69
SSU72Q9NP77 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSU72Q9NP77 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSU72Q9NP77 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.49□□□□□ -1.69
SSU72Q9NP77 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSU72Q9NP77 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSU72Q9NP77 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSU72Q9NP77 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 MIR335-201ENST00000362173 94 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 RNU1-76P-201ENST00000362903 159 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 U3.6-201ENST00000363622 211 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 Y_RNA.180-201ENST00000363867 113 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 Y_RNA.274-201ENST00000364714 101 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 RNU6-629P-201ENST00000384061 103 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 MIR301A-201ENST00000385261 86 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 RNU6-1025P-201ENST00000410629 104 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 AL117339.3-201ENST00000418733 162 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 AL158156.1-201ENST00000422509 473 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 SDAD1P3-201ENST00000427380 333 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 MTND3P9-201ENST00000429526 346 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 AC087650.1-201ENST00000431445 468 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 RPL12P11-201ENST00000439970 501 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 AL139109.1-201ENST00000455491 297 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 RPL23AP45-201ENST00000476406 468 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms