Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 API5P2-201ENST00000397055 1498 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AL079305.1-201ENST00000623159 3008 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC007823.1-201ENST00000569932 1566 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AC058791.1-201ENST00000608412 3198 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 SNORD9-201ENST00000362566 104 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 MIR491-201ENST00000384877 84 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 RN7SKP53-201ENST00000411337 315 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AC068533.1-201ENST00000418542 415 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 DBIP2-201ENST00000419076 262 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AL513185.2-201ENST00000425543 193 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AL158071.1-201ENST00000430315 461 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AL159987.2-201ENST00000432754 307 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 MTND4LP16-201ENST00000440828 295 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 CBWD4P-201ENST00000445695 655 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AC020550.1-201ENST00000447385 163 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 HMGN2P26-201ENST00000463169 339 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 RPL21P104-201ENST00000464143 478 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 RN7SL594P-201ENST00000470590 287 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AL049830.2-201ENST00000480072 201 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AC117522.3-201ENST00000507974 584 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 RNU4-29P-201ENST00000515943 174 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 SNORA31.3-201ENST00000516029 96 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 RNU2-27P-201ENST00000516185 142 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 RNU6-390P-201ENST00000516259 103 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 RN7SKP258-201ENST00000517151 304 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 ERHP1-201ENST00000523006 310 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AC023050.3-201ENST00000541142 333 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 RAB11AP2-201ENST00000545905 639 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AC008521.1-201ENST00000587471 187 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AL160281.1-201ENST00000605307 311 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AC007619.2-201ENST00000605743 379 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 uc_338.11-201ENST00000619132 160 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AL589994.2-201ENST00000621124 579 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AC090617.10-201ENST00000624308 134 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AC099654.5-201ENST00000636479 350 ntBASIC3.64□□□□□ -1.83
USP29Q9HBJ7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP29Q9HBJ7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP29Q9HBJ7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.63□□□□□ -1.83
USP29Q9HBJ7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP29Q9HBJ7 RNU6-600P-201ENST00000362524 99 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 Y_RNA.231-201ENST00000364358 102 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 SNORD6-201ENST00000365444 73 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 RNU6-1009P-201ENST00000390996 107 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 BX323014.1-201ENST00000412876 237 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.63□□□□□ -1.83
USP29Q9HBJ7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.63□□□□□ -1.83
USP29Q9HBJ7 HMGN2P7-201ENST00000456186 273 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 MTND1P11-201ENST00000456661 876 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 HSPE1P6-201ENST00000479457 291 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AC092451.1-201ENST00000480211 153 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AP001086.1-201ENST00000494882 321 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 RBBP4P6-201ENST00000508098 202 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AC078814.3-201ENST00000553036 491 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 MIR5195-201ENST00000583555 115 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AC005261.5-201ENST00000596280 355 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 RNU6-89P-201ENST00000606519 100 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AL355810.1-201ENST00000614629 552 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AC007998.5-201ENST00000622938 237 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AC048347.1-201ENST00000624621 427 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AC103710.2-202ENST00000641454 2853 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP29Q9HBJ7 AC092326.2-201ENST00000624772 1561 ntBASIC3.63□□□□□ -1.83
USP29Q9HBJ7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 RNU6-328P-201ENST00000390887 106 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 RNU6-387P-201ENST00000411331 105 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 RPS15AP6-201ENST00000420703 385 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 RPL7P46-201ENST00000425129 740 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 MTND3P23-201ENST00000431980 347 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 ELOCP23-201ENST00000452014 332 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 RPL9P32-201ENST00000464118 620 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms