Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 OR51A5P-201ENST00000415429 942 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 RPS15AP9-201ENST00000439856 381 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 RPL23AP20-201ENST00000447965 421 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 DPPA3P1-201ENST00000448050 469 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 AC027673.1-201ENST00000456245 405 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 RNU7-63P-201ENST00000459054 62 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 RPL9P33-201ENST00000484311 566 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 AC104806.1-201ENST00000508720 308 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 SNORD27.1-201ENST00000516319 72 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 RNU6-1315P-201ENST00000517187 99 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 IGKV2-26-201ENST00000518305 343 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 AP001893.2-201ENST00000526949 202 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 AC039056.2-201ENST00000622261 511 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 CR392039.5-201ENST00000623201 510 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 AL079305.1-201ENST00000623159 3008 ntBASIC3.22□□□□□ -1.89
BRF2Q9HAW0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
BRF2Q9HAW0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
BRF2Q9HAW0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 RNU4-35P-201ENST00000362588 141 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 RNA5SP197-201ENST00000363357 119 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 RNU6-1085P-201ENST00000363576 107 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 Y_RNA.534-201ENST00000384599 112 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 MIR218-2-201ENST00000385006 110 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 CISD1P1-201ENST00000393907 327 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 Z99127.3-201ENST00000448158 395 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 MTND1P18-201ENST00000448191 573 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AC003071.1-201ENST00000451219 789 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 MTATP6P7-201ENST00000453315 681 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AC025518.1-201ENST00000479856 347 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 RBBP4P6-201ENST00000508098 202 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 RNU6-914P-201ENST00000516749 109 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AP003122.3-201ENST00000526316 255 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AC084851.1-201ENST00000529105 249 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AC015917.1-201ENST00000579654 510 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AC006130.2-201ENST00000586202 326 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AL109618.2-201ENST00000605527 211 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 MIR15A-201ENST00000607334 83 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AC107294.3-201ENST00000609211 526 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 CR381653.2-201ENST00000624041 768 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AC099654.7-201ENST00000635788 2127 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 SRP72P2-201ENST00000344851 1979 ntBASIC3.21□□□□□ -1.9
BRF2Q9HAW0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
BRF2Q9HAW0 AL049781.1-201ENST00000623195 3585 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC103710.2-202ENST00000641454 2853 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 OR4G2P-201ENST00000328113 903 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 RNU1-73P-201ENST00000383971 164 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 RNU6-606P-201ENST00000384721 111 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 Y_RNA.576-201ENST00000384781 102 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 MIR767-201ENST00000390228 109 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 TIMM9P3-201ENST00000428659 274 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC006483.1-201ENST00000487308 313 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC109927.2-201ENST00000506416 303 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 RNU1-45P-201ENST00000517191 141 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC022634.1-201ENST00000520765 532 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 OR5B10P-201ENST00000532869 642 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AP003034.1-201ENST00000534621 422 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC005476.1-201ENST00000554427 397 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC027807.1-201ENST00000559921 996 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 DEFB131E-202ENST00000602581 683 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC146944.4-201ENST00000602697 718 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 MTND4LP5-201ENST00000605152 292 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 uc_338.11-201ENST00000619132 160 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AL359880.1-201ENST00000621879 266 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC005609.4-201ENST00000625071 447 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC012442.3-202ENST00000636742 206 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms