Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC007179.3-201ENST00000604976 235 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AC124864.2-201ENST00000624736 186 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AL160394.1-201ENST00000624765 724 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 MIR6073-201ENST00000352083 89 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 Y_RNA.159-201ENST00000363674 87 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 MTND1P21-201ENST00000412991 285 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 MTCO2P19-201ENST00000427513 598 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC112220.1-201ENST00000434628 355 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 C1DP4-201ENST00000455429 424 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 RPS3AP17-201ENST00000472594 777 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC090136.1-201ENST00000520009 240 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC022616.3-201ENST00000523940 148 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AK6P1-201ENST00000540219 478 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC123904.3-201ENST00000547218 814 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC087883.1-201ENST00000551882 391 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AL391840.1-201ENST00000571144 367 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 FAM60BP-201ENST00000578364 658 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 MIR5092-201ENST00000583139 88 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AC103710.2-201ENST00000609912 942 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 AL110115.1-201ENST00000614396 364 ntBASIC3.25□□□□□ -1.89
UPF2Q9HAU5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
UPF2Q9HAU5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 MIR422A-201ENST00000362286 90 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 RNU6-169P-201ENST00000365336 107 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 RNU6-1103P-201ENST00000384150 107 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AL138885.1-201ENST00000405921 675 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 GSTA9P-201ENST00000406231 611 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 RPL19P1-201ENST00000411635 428 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 PIGFP2-201ENST00000421400 651 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC233728.2-201ENST00000425348 757 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 RPS15AP9-201ENST00000439856 381 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC132479.1-201ENST00000449160 144 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC013267.1-201ENST00000458227 267 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 HMGN2P13-201ENST00000476476 274 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC019235.1-201ENST00000503847 207 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 SNORA31.8-201ENST00000516327 108 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 RNU6-798P-201ENST00000516912 103 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 RNA5SP337-201ENST00000517007 109 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC100870.1-201ENST00000522035 505 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 FAM92A1P1-201ENST00000528023 890 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AL133153.1-201ENST00000557756 303 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 COX6CP3-201ENST00000580869 223 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AL136363.1-201ENST00000605349 337 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC096577.2-201ENST00000611455 153 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 uc_338.12-201ENST00000616344 181 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AC072046.2-201ENST00000618366 268 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AL158209.2-201ENST00000619266 216 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 ZNF807-201ENST00000328088 1707 ntBASIC3.24□□□□□ -1.89
UPF2Q9HAU5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPF2Q9HAU5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 VTRNA1-1-201ENST00000363120 99 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 RNU6-181P-201ENST00000363225 107 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 SNORA25.6-201ENST00000364121 118 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 RNU6-173P-201ENST00000364215 104 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 Y_RNA.333-201ENST00000365274 102 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms