Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 GTF2IP13-201ENST00000438487 386 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC083863.1-201ENST00000438811 231 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC107399.1-201ENST00000451226 265 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 RPS24P6-201ENST00000452670 400 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 Y_RNA.635-201ENST00000459041 101 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 TBCAP3-201ENST00000512475 312 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 RN7SKP13-201ENST00000515933 244 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 SCARNA13-201ENST00000516672 275 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 MTCO3P23-201ENST00000561363 289 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 MIR4444-1-201ENST00000581696 74 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 MIR4444-2-201ENST00000584390 74 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC005034.5-201ENST00000604219 466 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 APOOP1-201ENST00000604695 592 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 ATP1B3P1-201ENST00000605365 821 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 MIR15A-201ENST00000607334 83 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC034102.8-201ENST00000615146 484 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
AMBRA1Q9C0C7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
AMBRA1Q9C0C7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
AMBRA1Q9C0C7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
AMBRA1Q9C0C7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
AMBRA1Q9C0C7 SDAD1P2-201ENST00000441308 2028 ntBASIC3.65□□□□□ -1.82
AMBRA1Q9C0C7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 RNA5SP399-201ENST00000364003 117 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 MIR7-3-201ENST00000384898 110 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 MIR483-201ENST00000385070 76 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 MIR548F5-201ENST00000408421 86 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AL513331.1-201ENST00000411908 397 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AC080125.1-201ENST00000414888 684 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AC108032.1-201ENST00000416706 207 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AL356095.1-201ENST00000417217 199 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 TOMM22P1-201ENST00000418578 312 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 FTH1P6-201ENST00000430768 320 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 MTCYBP6-201ENST00000441810 138 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 HMGN2P21-201ENST00000447764 270 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 RPL37P6-201ENST00000460682 294 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 RPL39P5-202ENST00000512505 151 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-927P-201ENST00000516199 100 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 RNA5SP454-201ENST00000517231 127 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 SNRPGP16-201ENST00000533275 226 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AC007151.1-201ENST00000572774 483 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AL670379.10-201ENST00000604330 253 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AP001330.4-201ENST00000604350 154 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AL670379.9-201ENST00000605428 253 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.812-201ENST00000610788 101 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.784-201ENST00000613803 101 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.787-201ENST00000616522 101 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.780-201ENST00000617336 101 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.801-201ENST00000619005 101 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AL360181.4-201ENST00000621752 134 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 AL161912.2-201ENST00000565707 3007 ntBASIC3.65□□□□□ -1.83
AMBRA1Q9C0C7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms