Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 SNORA62.3-201ENST00000365110 153 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 Y_RNA.570-201ENST00000384750 101 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 RNA5SP372-201ENST00000390836 115 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 RN7SKP100-201ENST00000411258 284 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 RPS12P23-201ENST00000419579 400 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 RPS20P1-201ENST00000434853 354 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 RPL12P18-201ENST00000437175 325 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 AC016700.2-201ENST00000446011 156 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 RPS15AP34-201ENST00000487776 387 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 RNU6-914P-201ENST00000516749 109 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 AP001781.1-201ENST00000530977 207 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 RPL23AP87-202ENST00000573039 466 ntBASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP3Q9BZ76 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 AC100778.3-201ENST00000580060 1750 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 RNA5SP191-201ENST00000362585 102 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 RNU6-512P-201ENST00000364438 103 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 RNU6-275P-201ENST00000364910 107 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 MIR130A-201ENST00000385274 89 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 RNA5SP113-201ENST00000410486 84 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 SSXP9-201ENST00000417503 292 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 AF186996.5-201ENST00000418098 904 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 AC099670.2-201ENST00000435130 321 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 RANP8-201ENST00000444720 713 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 GAPDHP25-201ENST00000447061 1001 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 RPS29P27-201ENST00000463711 170 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 RPL26P26-201ENST00000480251 434 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 FCF1P8-201ENST00000510322 597 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 GMPSP1-201ENST00000514075 579 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 IGLV3-24-201ENST00000517477 197 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 ATP5F1P5-201ENST00000526403 760 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 AC126615.2-201ENST00000553003 515 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 MIR3944-201ENST00000581277 108 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 DNAJC19P2-201ENST00000593340 302 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 AP000787.2-201ENST00000604432 568 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 AL591926.8-201ENST00000616876 211 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 snoU18.1-201ENST00000629629 71 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 THAP12P9-201ENST00000503971 2360 ntBASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNTNAP3Q9BZ76 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 RNU6-222P-201ENST00000362438 107 ntBASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 Y_RNA.534-201ENST00000384599 112 ntBASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 RPS4XP3-201ENST00000398541 413 ntBASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 ELOCP19-201ENST00000411919 318 ntBASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 AC073587.1-201ENST00000447093 876 ntBASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 TOMM22P6-201ENST00000465035 409 ntBASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 RNU5E-3P-201ENST00000515913 68 ntBASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 RNA5SP373-201ENST00000517271 95 ntBASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 MIR4311-201ENST00000580794 100 ntBASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CNTNAP3Q9BZ76 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms