Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 CPHL1P-201ENST00000461341 3407 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AC006971.1-201ENST00000407916 4486 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 RNA5SP509-201ENST00000364577 119 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 Y_RNA.394-201ENST00000383942 103 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 SNORD116-29-201ENST00000384516 83 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 RNU6-95P-201ENST00000384697 107 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 MIR10A-201ENST00000385043 110 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 SNORD73A-201ENST00000386062 65 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 RPL21P17-201ENST00000397467 475 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 AL162591.2-201ENST00000449634 317 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 AC092798.1-201ENST00000458542 409 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 RN7SL585P-201ENST00000470538 280 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 RPS26P15-201ENST00000488067 348 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 AC146944.2-203ENST00000502493 354 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 AC139495.1-202ENST00000513164 354 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 MIR1254-2-201ENST00000579553 63 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 ELOCP5-201ENST00000604924 333 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 MIR6716-201ENST00000613413 80 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 AC126177.8-201ENST00000618339 1015 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 U3.53-201ENST00000628922 216 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 FAM35BP-202ENST00000497389 3337 ntBASIC4.36□□□□□ -1.71
TRIM55Q9BYV6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 RNA5SP515-201ENST00000364570 118 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 RNU6-1329P-201ENST00000365664 107 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 XGY1-201ENST00000381172 446 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 SDHCP2-201ENST00000398565 501 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 RPS15AP6-201ENST00000420703 385 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 MTCO2P27-201ENST00000420740 428 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 PGBD4P6-201ENST00000421501 610 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 HMGN1P11-201ENST00000508668 303 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 AC096745.1-201ENST00000509945 370 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 RNA5SP73-201ENST00000516744 108 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 Y_RNA.718-201ENST00000517110 102 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 APOOP3-201ENST00000536787 586 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 H3F3AP1-201ENST00000559984 334 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 AL645944.1-201ENST00000603857 493 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 AC012603.1-201ENST00000606424 528 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 AL627309.6-201ENST00000606857 840 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 AC010378.1-201ENST00000619270 362 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 U2.21-201ENST00000637295 81 ntBASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM55Q9BYV6 AC007656.2-201ENST00000624902 4547 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 ZNF962P-201ENST00000443465 3140 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 SNORA71.2-201ENST00000364941 134 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 Y_RNA.482-201ENST00000384377 111 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 RNU6-601P-201ENST00000384540 107 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 RNY4P36-201ENST00000391116 96 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AL356057.2-201ENST00000403318 432 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AL391417.1-201ENST00000404100 426 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 RNA5SP306-201ENST00000411087 107 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 RN7SKP263-201ENST00000411194 309 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AF228730.4-201ENST00000421457 183 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 RBMY1KP-201ENST00000423480 476 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 UBE2V1P4-201ENST00000425374 344 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 RPL7P28-201ENST00000437739 740 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms