Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 EI24P1-201ENST00000416584 867 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 ATG3P1-201ENST00000419507 911 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 TXNP1-201ENST00000441872 371 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 MTND5P22-201ENST00000458380 195 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 snoU13.24-201ENST00000458998 104 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 MIR2053-201ENST00000459295 91 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 HMGB1P22-201ENST00000505315 124 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 RNU6-1332P-201ENST00000516666 104 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 RNU1-45P-201ENST00000517191 141 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AC120057.2-201ENST00000571520 271 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 MIR4429-201ENST00000580105 73 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AC053481.4-201ENST00000583164 216 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AL606490.9-201ENST00000603331 271 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AC133104.2-201ENST00000615272 193 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 MIR6128-201ENST00000615528 109 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AL158196.1-201ENST00000616786 434 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AL669831.3-213ENST00000636676 183 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 KPNA2P1-201ENST00000458289 1591 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 Y_RNA.133-201ENST00000363428 110 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 SNORA62.3-201ENST00000365110 153 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 RPS4XP7-201ENST00000406274 780 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AL513331.1-201ENST00000411908 397 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 RPS12P24-201ENST00000412619 387 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 RPL21P109-201ENST00000422213 475 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AL160275.3-201ENST00000423876 471 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 RPS24P6-201ENST00000452670 400 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC087884.1-201ENST00000469738 328 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC092451.1-201ENST00000480211 153 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC006517.1-201ENST00000480485 328 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 RNU6-1137P-201ENST00000517073 99 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 RN7SKP295-201ENST00000517264 153 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 IGKV2D-23-201ENST00000518179 286 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 SNRPGP16-201ENST00000533275 226 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC100830.2-201ENST00000581636 240 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC007938.3-201ENST00000604965 623 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC106900.2-201ENST00000604994 317 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 MIR4727-201ENST00000622232 55 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 MIR6500-201ENST00000622700 86 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AC091925.1-201ENST00000623204 462 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 AL078596.1-201ENST00000624856 447 ntBASIC3.86□□□□□ -1.79
NDC1Q9BTX1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NDC1Q9BTX1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RNU6-593P-201ENST00000364716 112 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RNU6-128P-201ENST00000383976 107 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RNU6-1105P-201ENST00000384774 107 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 TOMM22P1-201ENST00000418578 312 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AL590632.1-201ENST00000424289 371 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AL358176.2-201ENST00000425769 204 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RPL23AP69-201ENST00000431134 458 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AL358472.1-201ENST00000431295 329 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms