| MTA3 | Q9BTC8 | XIST_intron.1-201 | ENST00000619444 | 68 nt | BASIC | 4.6 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AL589994.2-201 | ENST00000621124 | 579 nt | BASIC | 4.6 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AP001486.2-201 | ENST00000561652 | 5113 nt | BASIC | 4.6 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AC007256.1-201 | ENST00000392253 | 2765 nt | BASIC | 4.6 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | LINC00648-202 | ENST00000555985 | 2885 nt | TSL 2 BASIC | 4.6 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | MBD5-202 | ENST00000407073 | 9512 nt | TSL 1 (best) BASIC | 4.6 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | MTND5P19-201 | ENST00000424872 | 1794 nt | BASIC | 4.6 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | DDX10P1-201 | ENST00000448545 | 1933 nt | BASIC | 4.6 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | ST7-221 | ENST00000465133 | 2155 nt | TSL 5 BASIC | 4.6 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | CLCA4-201 | ENST00000370563 | 3211 nt | APPRIS P1 TSL 1 (best) BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | OR10D3-203 | ENST00000641546 | 3566 nt | APPRIS P1 BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | USH2A-201 | ENST00000307340 | 18883 nt | APPRIS P1 TSL 1 (best) BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | OR6A2-202 | ENST00000641196 | 4295 nt | APPRIS P1 BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | LRMP-221 | ENST00000636465 | 4540 nt | APPRIS ALT2 TSL 5 BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | ACEA_U3.1-201 | ENST00000363057 | 217 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | Y_RNA.112-201 | ENST00000363250 | 102 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | Y_RNA.133-201 | ENST00000363428 | 110 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | RN7SKP227-201 | ENST00000364445 | 330 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | RNA5SP235-201 | ENST00000365411 | 114 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | SNORD116-11-201 | ENST00000383882 | 92 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | U1.1-201 | ENST00000384101 | 164 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | RNU6-1105P-201 | ENST00000384774 | 107 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AL360182.1-201 | ENST00000397433 | 468 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AL356057.3-201 | ENST00000402607 | 340 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AL583834.1-201 | ENST00000406943 | 343 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | RNA5SP129-201 | ENST00000410276 | 118 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | RNU4-78P-201 | ENST00000410940 | 126 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | RNU6-954P-201 | ENST00000411355 | 107 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | TXNP1-201 | ENST00000441872 | 371 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | IPO7P1-201 | ENST00000442031 | 636 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | RPS15AP27-201 | ENST00000449183 | 343 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AC008481.1-201 | ENST00000463278 | 396 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AC010285.1-201 | ENST00000470580 | 392 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | RPL21P93-201 | ENST00000480465 | 489 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AC092666.1-202 | ENST00000493400 | 442 nt | TSL 2 BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | SRP72-202 | ENST00000504757 | 745 nt | TSL 2 BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AC079140.5-201 | ENST00000507882 | 310 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | ZCCHC10-206 | ENST00000509008 | 608 nt | APPRIS ALT2 TSL 2 BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AC092440.1-201 | ENST00000512563 | 571 nt | TSL 4 BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | UTS2-201 | ENST00000054668 | 420 nt | APPRIS P4 TSL 1 (best) BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AC008521.1-201 | ENST00000587471 | 187 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AF038458.1-201 | ENST00000588406 | 262 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AL589765.7-201 | ENST00000601684 | 629 nt | TSL 3 BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | AL138889.2-201 | ENST00000603883 | 242 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | WFDC11-203 | ENST00000618797 | 561 nt | APPRIS P1 TSL 5 BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | MIR6500-201 | ENST00000622700 | 86 nt | BASIC | 4.59 | □□□□□ -1.67 | | |
| MTA3 | Q9BTC8 | ATP8B4-201 | ENST00000284509 | 5676 nt | APPRIS P1 TSL 5 BASIC | 4.59 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | MGA-202 | ENST00000545763 | 11413 nt | APPRIS ALT2 TSL 5 BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | ASAH2-201 | ENST00000329428 | 2184 nt | TSL 1 (best) BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | MBNL1-224 | ENST00000545754 | 5147 nt | TSL 5 BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | LINC01733-201 | ENST00000449316 | 4604 nt | TSL 1 (best) BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNU6-989P-201 | ENST00000362756 | 107 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RGS4-201 | ENST00000367906 | 930 nt | TSL 1 (best) BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNU6-946P-201 | ENST00000383878 | 107 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNU6-1127P-201 | ENST00000384580 | 107 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AC113618.1-201 | ENST00000416747 | 285 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AL157378.1-201 | ENST00000424506 | 265 nt | TSL 5 BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | SKA2P1-201 | ENST00000425592 | 390 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AL355340.1-201 | ENST00000433085 | 344 nt | TSL 3 BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | SNAP23P1-201 | ENST00000433229 | 246 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AC018359.1-201 | ENST00000442567 | 574 nt | TSL 4 BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AC009468.2-201 | ENST00000457372 | 366 nt | TSL 5 BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | HMGB1P25-201 | ENST00000468402 | 607 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AC104304.1-201 | ENST00000505797 | 291 nt | APPRIS P1 TSL 3 BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RBBP4P6-201 | ENST00000508098 | 202 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNU6-976P-201 | ENST00000516086 | 111 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNA5SP164-201 | ENST00000516533 | 110 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNA5SP468-201 | ENST00000516782 | 93 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNU6-685P-201 | ENST00000517088 | 95 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RN7SKP289-201 | ENST00000517244 | 295 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AC096558.2-201 | ENST00000546678 | 506 nt | TSL 3 BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AC053481.4-201 | ENST00000583164 | 216 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AL670379.4-201 | ENST00000605279 | 254 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AP000654.2-201 | ENST00000605633 | 586 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | LINC00310-205 | ENST00000609062 | 863 nt | TSL 5 BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | U2.17-201 | ENST00000611454 | 95 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AC012409.4-201 | ENST00000612923 | 249 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | TUG1_2.1-201 | ENST00000614234 | 87 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AL391261.4-201 | ENST00000616012 | 481 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AC110801.1-201 | ENST00000623590 | 212 nt | BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | PRKAA2-202 | ENST00000610361 | 9280 nt | APPRIS ALT1 TSL 5 BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | NUDT12-201 | ENST00000230792 | 3492 nt | APPRIS P1 TSL 1 (best) BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RMDN2-205 | ENST00000407257 | 2280 nt | TSL 5 BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RGPD1-202 | ENST00000409776 | 6692 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.58 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | OR6C2-203 | ENST00000641516 | 1682 nt | APPRIS P1 BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | GAB1-203 | ENST00000505913 | 2477 nt | TSL 2 BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | CSNK1G3-203 | ENST00000361991 | 2424 nt | APPRIS P3 TSL 1 (best) BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | ATP7A-201 | ENST00000341514 | 8483 nt | APPRIS P1 TSL 1 (best) BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | FAM169A-201 | ENST00000389156 | 5990 nt | APPRIS P1 TSL 1 (best) BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | MUC15-201 | ENST00000281268 | 2968 nt | TSL 5 BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | AL033397.1-201 | ENST00000502390 | 3653 nt | TSL 2 BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | C18orf54-202 | ENST00000382911 | 4056 nt | TSL 5 BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | FKTN-209 | ENST00000602661 | 2576 nt | APPRIS P1 TSL 1 (best) BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNU6-263P-201 | ENST00000363811 | 107 nt | BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNA5SP97-201 | ENST00000365006 | 84 nt | BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNA5SP283-201 | ENST00000365604 | 119 nt | BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNU6-196P-201 | ENST00000384315 | 107 nt | BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNU6-1106P-201 | ENST00000390845 | 107 nt | BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | MIR450B-201 | ENST00000401182 | 78 nt | BASIC | 4.57 | □□□□□ -1.68 | | |
| MTA3 | Q9BTC8 | RNA5SP39-201 | ENST00000411245 | 120 nt | BASIC | 4.57 | □□□□□ -1.68 | | |