Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 NANOGP2-201ENST00000435391 727 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 MTND1P28-201ENST00000435623 950 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 FABP5P14-201ENST00000437273 393 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC018634.1-201ENST00000437554 401 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC096638.1-201ENST00000444678 216 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 PAXBP1P1-201ENST00000449315 447 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC080013.2-201ENST00000460866 323 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 DYNLL1P5-201ENST00000467158 270 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC072039.1-201ENST00000477611 581 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC104090.1-201ENST00000506341 1171 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 LTV1P1-201ENST00000510683 1237 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC008837.2-201ENST00000513076 418 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC112198.4-201ENST00000515450 351 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 MIR892C-201ENST00000516410 77 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 SNORD19.2-201ENST00000516978 73 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 RNA5SP165-201ENST00000517142 115 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 HSPE1P18-201ENST00000517602 280 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC021739.1-201ENST00000559631 174 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 MIR4648-201ENST00000580107 72 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 VN1R83P-201ENST00000595685 445 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC005261.5-201ENST00000596280 355 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC116312.1-201ENST00000606841 314 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AL161423.1-201ENST00000613700 262 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC098657.3-201ENST00000620434 263 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC009831.4-201ENST00000620744 325 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 uc_338.20-201ENST00000621563 178 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AC025048.6-202ENST00000627667 438 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 FAM133CP-201ENST00000332869 704 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 RNU6-289P-201ENST00000364093 107 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 RNA5SP125-201ENST00000364843 120 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 U6atac.2-201ENST00000408644 118 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 RNA5SP338-201ENST00000410495 85 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 RNU2-68P-201ENST00000410878 191 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AL356379.1-201ENST00000414105 126 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AL953862.1-201ENST00000423016 168 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 RPL23AP76-201ENST00000441860 458 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AC124916.1-201ENST00000444020 547 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 FAM103A2P-201ENST00000444122 354 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 MEMO1P3-201ENST00000459811 302 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 RPL37P6-201ENST00000460682 294 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AC008481.1-201ENST00000463278 396 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AC104435.1-201ENST00000483483 166 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 HMGB1P36-201ENST00000487709 576 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 IGKV3-31-201ENST00000523109 329 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 MRPS36P5-201ENST00000551909 298 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 MIR3167-201ENST00000579623 85 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AC090186.1-201ENST00000605991 572 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AL121652.1-201ENST00000608851 448 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AC087241.4-201ENST00000612441 480 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 uc_338.14-201ENST00000613162 166 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK3BQ9BT76 AC107075.1-201ENST00000613695 314 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 PISRT1-201ENST00000626175 531 ntBASIC1.53□□□□□ -2.16
UPK3BQ9BT76 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
UPK3BQ9BT76 MTND5P6-201ENST00000422338 1798 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 DDX43P2-201ENST00000604753 1354 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 RNU6-1167P-201ENST00000363227 94 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 RNU6-560P-201ENST00000364007 108 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 RNA5SP138-201ENST00000365098 114 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
UPK3BQ9BT76 MIR221-201ENST00000385135 110 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 MIR1284-201ENST00000408337 120 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 RN7SKP158-201ENST00000410453 326 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 USP9YP26-201ENST00000421008 661 ntBASIC1.52□□□□□ -2.17
UPK3BQ9BT76 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms