Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RNA5SP269-201ENST00000459032 137 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.29□□□□□ -1.88
SDF4Q9BRK5 SUMO2P6-201ENST00000505273 288 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.29□□□□□ -1.88
SDF4Q9BRK5 RNU7-51P-201ENST00000516560 62 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 AC022634.1-201ENST00000520765 532 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 AC087373.1-201ENST00000524920 491 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.29□□□□□ -1.88
SDF4Q9BRK5 AC008739.2-201ENST00000597006 317 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 Z94722.1-201ENST00000604328 474 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.29□□□□□ -1.88
SDF4Q9BRK5 DUSP12P1-201ENST00000612874 516 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 AC008498.1-201ENST00000613012 531 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 AL589994.2-201ENST00000621124 579 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 AC010338.1-201ENST00000621823 717 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 AC002064.3-201ENST00000623448 346 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.29□□□□□ -1.88
SDF4Q9BRK5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 RNU5E-1-201ENST00000362477 120 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 SNORD56.2-201ENST00000363242 71 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 Y_RNA.111-201ENST00000363248 100 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 MIR512-1-201ENST00000384913 84 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 MIR767-201ENST00000390228 109 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 NDUFS5P4-201ENST00000412983 318 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 AC009414.1-201ENST00000427200 443 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 HMGB1P9-201ENST00000429856 646 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 OR2B8P-201ENST00000432841 938 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 COX6CP2-201ENST00000444980 225 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 MTND1P3-201ENST00000484956 952 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 AC060788.1-201ENST00000521318 469 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 AC020895.1-201ENST00000595362 272 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 RPL23AP78-201ENST00000599928 470 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 Z99497.2-201ENST00000603634 310 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 MTND4LP5-201ENST00000605152 292 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 AP002360.4-201ENST00000606980 481 ntBASIC3.28□□□□□ -1.88
SDF4Q9BRK5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.28□□□□□ -1.88
SDF4Q9BRK5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SDF4Q9BRK5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SDF4Q9BRK5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SDF4Q9BRK5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SDF4Q9BRK5 FAM35CP-201ENST00000554755 2470 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 RNY3P9-201ENST00000384727 106 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 RNA5SP344-201ENST00000411081 104 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 RPS3AP3-201ENST00000411933 242 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 HMGN1P14-201ENST00000412459 517 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 RPS12P24-201ENST00000412619 387 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 RPL26P27-201ENST00000414397 437 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.27□□□□□ -1.89
SDF4Q9BRK5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.27□□□□□ -1.89
SDF4Q9BRK5 AC093151.1-201ENST00000427711 313 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 GTF2IP20-201ENST00000431663 360 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 AL135938.1-201ENST00000443141 297 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 RPS27AP8-201ENST00000452665 445 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 RPS29P20-201ENST00000489592 171 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 AC026801.1-201ENST00000497178 464 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.27□□□□□ -1.89
SDF4Q9BRK5 RNA5SP367-201ENST00000516557 118 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.27□□□□□ -1.89
SDF4Q9BRK5 AC025281.1-201ENST00000567026 265 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 AC012414.6-201ENST00000568241 401 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.27□□□□□ -1.89
SDF4Q9BRK5 AL033523.1-201ENST00000605153 153 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 AC107871.2-201ENST00000612894 502 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 MTND5P42-201ENST00000637720 498 ntBASIC3.27□□□□□ -1.89
SDF4Q9BRK5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SDF4Q9BRK5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AC073343.1-201ENST00000328239 651 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 FGF7P2-201ENST00000332473 296 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 RNU1-73P-201ENST00000383971 164 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 RNY3P10-201ENST00000384764 102 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 RNU6-193P-201ENST00000410977 107 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 BPY2DP-201ENST00000422208 265 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 SKA2P1-201ENST00000425592 390 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 RPL36AP53-201ENST00000432891 316 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 RPL37P4-201ENST00000448908 268 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AL033528.1-201ENST00000453780 140 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 SNRPGP9-201ENST00000456025 225 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 snoU109.1-201ENST00000459339 135 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 SNORD42A-201ENST00000459584 64 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms