Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC007179.3-201ENST00000604976 235 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AC135507.2-201ENST00000612443 309 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AL731566.2-201ENST00000618971 317 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 YWHAEP7-203ENST00000622054 312 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AL136360.1-201ENST00000503377 1900 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.96□□□□□ -2.25
VPS25Q9BRG1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 SNORD115-3-201ENST00000363100 82 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 RNU6-115P-201ENST00000364310 107 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 SNORA70.7-201ENST00000384159 133 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC016769.2-201ENST00000414815 475 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 CCDC58P2-201ENST00000417131 366 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC008173.1-201ENST00000418901 264 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 MRPL35P3-201ENST00000421557 364 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 PPP1R11P2-201ENST00000423543 382 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 SKA2P1-201ENST00000425592 390 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC006946.1-201ENST00000429106 328 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 DYNLT3P2-201ENST00000442517 295 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC017099.1-201ENST00000448261 1028 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AL353705.4-201ENST00000449661 238 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 RPS15AP17-201ENST00000470598 390 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC017007.3-201ENST00000479865 435 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 RPL9P6-201ENST00000492764 598 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC017037.2-201ENST00000513850 890 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 SNORA70.24-201ENST00000517233 118 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC009097.3-201ENST00000563557 1018 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC023824.3-201ENST00000569003 562 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC021646.1-201ENST00000605469 484 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC092953.2-201ENST00000608000 699 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 MIR8074-201ENST00000615081 81 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 AC104820.1-201ENST00000624183 307 ntBASIC0.96□□□□□ -2.26
VPS25Q9BRG1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
VPS25Q9BRG1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
VPS25Q9BRG1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
VPS25Q9BRG1 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 Z75746.1-201ENST00000440243 2080 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 ZNF876P-202ENST00000398732 1485 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 SNORA62.1-201ENST00000364287 154 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 MIR758-201ENST00000390227 88 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 SNORA48.2-201ENST00000390926 124 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AL591034.2-201ENST00000402839 359 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 RPL37P10-201ENST00000412884 288 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AL136133.1-201ENST00000413694 376 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AL135786.1-201ENST00000415892 214 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 Z93242.1-201ENST00000427102 353 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AL356320.1-201ENST00000429616 163 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 RPL7P34-201ENST00000433316 712 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AL353691.1-201ENST00000451332 387 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AC092436.1-201ENST00000506450 503 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AC093677.1-201ENST00000514414 678 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS25Q9BRG1 CYB5AP5-201ENST00000549779 389 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 SULT1C2P1-202ENST00000562418 459 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
VPS25Q9BRG1 BPTFP1-201ENST00000579209 492 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AP001429.1-201ENST00000602568 530 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 DUXAP11-201ENST00000603858 526 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AC022387.2-201ENST00000604050 448 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AC239803.2-201ENST00000610161 430 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AC096586.1-201ENST00000610267 561 ntBASIC0.95□□□□□ -2.26
VPS25Q9BRG1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
VPS25Q9BRG1 AC006026.1-201ENST00000444025 1803 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 MTND5P9-201ENST00000503854 1755 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
VPS25Q9BRG1 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VPS25Q9BRG1 SNORA25.8-201ENST00000364831 128 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 Z98749.2-208ENST00000381646 500 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 RNU1-39P-201ENST00000383897 165 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 RNA5SP501-201ENST00000410990 112 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 AC097463.2-201ENST00000421074 142 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 AC008850.1-201ENST00000427546 362 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.94□□□□□ -2.26
VPS25Q9BRG1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC0.94□□□□□ -2.26
VPS25Q9BRG1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.94□□□□□ -2.26
VPS25Q9BRG1 AC006512.1-201ENST00000468816 291 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 AC106872.3-201ENST00000495104 446 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.94□□□□□ -2.26
VPS25Q9BRG1 BOLA3P3-201ENST00000505182 232 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 RNU6-885P-201ENST00000516607 104 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC0.94□□□□□ -2.26
VPS25Q9BRG1 AP003122.3-201ENST00000526316 255 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 AC124293.1-201ENST00000530034 493 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.94□□□□□ -2.26
VPS25Q9BRG1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.94□□□□□ -2.26
VPS25Q9BRG1 NIFKP8-201ENST00000560500 874 ntBASIC0.94□□□□□ -2.26
VPS25Q9BRG1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms