Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU6-928P-201ENST00000516876 104 ntBASIC0.55□□□□□ -2.32
CFAP54Q96N23 RRN3P3-201ENST00000549207 578 ntBASIC0.55□□□□□ -2.32
CFAP54Q96N23 MIR4658-201ENST00000584344 65 ntBASIC0.55□□□□□ -2.32
CFAP54Q96N23 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.55□□□□□ -2.32
CFAP54Q96N23 DUSP12P1-201ENST00000612874 516 ntBASIC0.55□□□□□ -2.32
CFAP54Q96N23 MIR5087-201ENST00000635826 76 ntBASIC0.55□□□□□ -2.32
CFAP54Q96N23 RNA5SP368-201ENST00000364298 116 ntBASIC0.54□□□□□ -2.32
CFAP54Q96N23 U8.14-201ENST00000390843 143 ntBASIC0.54□□□□□ -2.32
CFAP54Q96N23 AL356432.1-201ENST00000405809 419 ntBASIC0.54□□□□□ -2.32
CFAP54Q96N23 RNU1-98P-201ENST00000458992 160 ntBASIC0.54□□□□□ -2.32
CFAP54Q96N23 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.54□□□□□ -2.32
CFAP54Q96N23 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.54□□□□□ -2.32
CFAP54Q96N23 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.54□□□□□ -2.32
CFAP54Q96N23 AL355297.2-201ENST00000604792 129 ntBASIC0.54□□□□□ -2.32
CFAP54Q96N23 AC004908.2-201ENST00000609090 574 ntBASIC0.54□□□□□ -2.32
CFAP54Q96N23 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CFAP54Q96N23 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CFAP54Q96N23 RNU6-72P-201ENST00000384285 79 ntBASIC0.53□□□□□ -2.32
CFAP54Q96N23 MIR153-2-201ENST00000385225 87 ntBASIC0.53□□□□□ -2.32
CFAP54Q96N23 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.53□□□□□ -2.32
CFAP54Q96N23 MTND6P13-201ENST00000443510 523 ntBASIC0.53□□□□□ -2.32
CFAP54Q96N23 HMGN2P9-201ENST00000476875 229 ntBASIC0.53□□□□□ -2.32
CFAP54Q96N23 AC109927.2-201ENST00000506416 303 ntBASIC0.53□□□□□ -2.32
CFAP54Q96N23 AC118282.2-201ENST00000508739 374 ntBASIC0.53□□□□□ -2.32
CFAP54Q96N23 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.53□□□□□ -2.32
CFAP54Q96N23 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.53□□□□□ -2.32
CFAP54Q96N23 CYP4A27P-201ENST00000567218 190 ntBASIC0.53□□□□□ -2.32
CFAP54Q96N23 ELOCP5-201ENST00000604924 333 ntBASIC0.53□□□□□ -2.32
CFAP54Q96N23 AP003122.6-201ENST00000623831 495 ntBASIC0.53□□□□□ -2.32
CFAP54Q96N23 AC121333.1-201ENST00000567488 2709 ntBASIC0.53□□□□□ -2.32
CFAP54Q96N23 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CFAP54Q96N23 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.53□□□□□ -2.33
CFAP54Q96N23 SNORD26-201ENST00000384147 75 ntBASIC0.53□□□□□ -2.33
CFAP54Q96N23 AC106901.1-201ENST00000425086 698 ntBASIC0.53□□□□□ -2.33
CFAP54Q96N23 AC025857.1-201ENST00000525252 377 ntBASIC0.53□□□□□ -2.33
CFAP54Q96N23 AC004817.2-201ENST00000561794 651 ntBASIC0.53□□□□□ -2.33
CFAP54Q96N23 MIR4458-201ENST00000578872 75 ntBASIC0.53□□□□□ -2.33
CFAP54Q96N23 AL096840.1-201ENST00000603287 93 ntBASIC0.53□□□□□ -2.33
CFAP54Q96N23 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.53□□□□□ -2.33
CFAP54Q96N23 ZNF519P1-201ENST00000449011 1626 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 CIR1P3-201ENST00000405137 479 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 AC013268.2-201ENST00000420753 337 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 XKRYP1-201ENST00000423438 492 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 XKRYP2-201ENST00000432915 492 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 MTND5P15-201ENST00000434246 349 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 AC009296.1-201ENST00000443146 155 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CFAP54Q96N23 AC020699.1-201ENST00000505161 445 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.52□□□□□ -2.33
CFAP54Q96N23 MIR4287-201ENST00000579398 78 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.52□□□□□ -2.33
CFAP54Q96N23 RN7SKP61-201ENST00000410642 295 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 AC073464.3-201ENST00000422564 712 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 MTND5P14-201ENST00000441481 1267 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.52□□□□□ -2.33
CFAP54Q96N23 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.52□□□□□ -2.33
CFAP54Q96N23 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.52□□□□□ -2.33
CFAP54Q96N23 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.52□□□□□ -2.33
CFAP54Q96N23 SNRPGP17-201ENST00000603780 214 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 MZT1P2-201ENST00000604387 248 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 AC107214.2-201ENST00000608204 634 ntBASIC0.52□□□□□ -2.33
CFAP54Q96N23 AL442644.1-201ENST00000454390 3105 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 RNU6-1180P-201ENST00000364935 107 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 SNORD84-203ENST00000584275 78 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.51□□□□□ -2.33
CFAP54Q96N23 AC005332.10-201ENST00000612725 619 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 CFTRP2-201ENST00000634304 199 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CFAP54Q96N23 AL591034.1-201ENST00000407447 340 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 RNU6-1334P-201ENST00000516032 105 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 AL592148.2-201ENST00000612210 372 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 AC009318.3-201ENST00000616916 503 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CFAP54Q96N23 AC093155.1-201ENST00000440164 826 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 SSXP4-201ENST00000451349 245 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 Y_RNA.757-201ENST00000578934 114 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 AC245128.3-201ENST00000594721 748 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.51□□□□□ -2.33
CFAP54Q96N23 AC013470.4-201ENST00000619978 986 ntBASIC0.51□□□□□ -2.33
CFAP54Q96N23 MIR146A-201ENST00000385201 99 ntBASIC0.5□□□□□ -2.33
CFAP54Q96N23 AC093716.1-201ENST00000435923 377 ntBASIC0.5□□□□□ -2.33
CFAP54Q96N23 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.5□□□□□ -2.33
CFAP54Q96N23 AL160236.1-201ENST00000556317 195 ntBASIC0.5□□□□□ -2.33
CFAP54Q96N23 AC136932.1-201ENST00000574771 208 ntBASIC0.5□□□□□ -2.33
CFAP54Q96N23 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.5□□□□□ -2.33
CFAP54Q96N23 AL133507.1-201ENST00000605269 557 ntBASIC0.5□□□□□ -2.33
CFAP54Q96N23 AC073111.2-201ENST00000605657 1075 ntBASIC0.5□□□□□ -2.33
CFAP54Q96N23 CCT4P2-201ENST00000233836 1548 ntBASIC0.5□□□□□ -2.33
CFAP54Q96N23 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CFAP54Q96N23 MTATP6P4-201ENST00000427725 675 ntBASIC0.5□□□□□ -2.33
CFAP54Q96N23 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.5□□□□□ -2.33
CFAP54Q96N23 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.5□□□□□ -2.33
CFAP54Q96N23 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.5□□□□□ -2.33
CFAP54Q96N23 SNORA4.3-201ENST00000365564 137 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 RNU6-1181P-201ENST00000384191 106 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 RNU6-700P-201ENST00000391043 107 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 AL353706.1-201ENST00000436728 494 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 RABEPKP1-201ENST00000440529 1026 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms