Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RNA5SP210-201ENST00000391034 120 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 NDUFS5P1-201ENST00000405668 289 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 RNU2-68P-201ENST00000410878 191 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 ELOCP17-201ENST00000414751 326 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 HMGB1P27-201ENST00000431429 603 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 GPM6BP2-201ENST00000432046 144 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 RPL36AP6-201ENST00000435770 321 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AC098831.1-201ENST00000440661 216 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AL591719.1-201ENST00000444669 744 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 GPM6BP1-201ENST00000446387 144 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 FABP5P15-201ENST00000453566 214 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 RPS27AP10-201ENST00000496103 208 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AC116347.2-201ENST00000514912 523 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 RNA5SP320-201ENST00000516263 124 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 RNA5SP471-201ENST00000516971 106 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 RNA5SP165-201ENST00000517142 115 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 ELOCP31-201ENST00000540463 467 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 PCMTD1P2-201ENST00000565017 355 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AC091489.2-201ENST00000566263 604 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 MIR4513-201ENST00000581077 86 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AC013562.2-201ENST00000611632 603 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 DUSP12P1-201ENST00000612874 516 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 uc_338.12-201ENST00000616344 181 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 U4.3-201ENST00000621047 82 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AC006927.3-201ENST00000638789 384 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 ELF2P3-201ENST00000445099 1506 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 RNU1-73P-201ENST00000383971 164 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 RNU6-750P-201ENST00000390946 107 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AL021407.1-201ENST00000404531 386 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 RPL26P27-201ENST00000414397 437 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC096649.2-201ENST00000416186 393 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC010099.3-201ENST00000423896 409 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 MTCO2P17-201ENST00000424336 677 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 SKA2P1-201ENST00000425592 390 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC104651.1-201ENST00000427559 735 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC009296.1-201ENST00000443146 155 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC026801.1-201ENST00000497178 464 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 RN7SKP24-201ENST00000515888 284 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 EEF1A1P37-201ENST00000522748 715 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AP006587.4-201ENST00000526053 529 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC004486.1-201ENST00000546846 233 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC123904.2-201ENST00000548059 300 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC103810.1-201ENST00000579873 453 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC007621.1-201ENST00000604544 437 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 BX664608.1-201ENST00000610519 487 ntBASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF560Q96MR9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.71□□□□□ -1.98
ZNF560Q96MR9 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF560Q96MR9 RNU6-501P-201ENST00000364072 100 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 RN7SKP226-201ENST00000364912 300 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 RNY3P13-201ENST00000365542 102 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF560Q96MR9 SNORD115.1-201ENST00000391109 76 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 AL356057.2-201ENST00000403318 432 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.71□□□□□ -1.98
ZNF560Q96MR9 SUMO1P4-201ENST00000429430 302 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF560Q96MR9 RPS15AP7-201ENST00000439294 405 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.71□□□□□ -1.98
ZNF560Q96MR9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF560Q96MR9 AC009961.3-201ENST00000449832 765 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 SNORD97-201ENST00000459187 142 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 AC107626.1-201ENST00000471084 183 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 AP000852.1-201ENST00000472460 573 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.71□□□□□ -1.98
ZNF560Q96MR9 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.71□□□□□ -1.98
ZNF560Q96MR9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF560Q96MR9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms