Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 MTCO1P23-201ENST00000415223 1526 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 Y_RNA.185-201ENST00000363894 100 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SPG11Q96JI7 AC068050.1-201ENST00000394891 380 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 RNU2-71P-201ENST00000411395 189 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 AC118469.1-201ENST00000442943 488 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 RPL30P14-201ENST00000482744 348 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 AC020699.1-201ENST00000505161 445 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 RNU6-229P-201ENST00000516614 102 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.58□□□□□ -2.32
SPG11Q96JI7 MIR4512-201ENST00000583257 77 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.58□□□□□ -2.32
SPG11Q96JI7 AL356379.1-201ENST00000414105 126 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 MTATP6P4-201ENST00000427725 675 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 AL591043.1-201ENST00000432461 424 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.58□□□□□ -2.32
SPG11Q96JI7 RPS26P56-201ENST00000444468 240 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 OR6C72P-201ENST00000451403 892 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.58□□□□□ -2.32
SPG11Q96JI7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.58□□□□□ -2.32
SPG11Q96JI7 MRPS17P9-201ENST00000511924 393 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 RN7SKP34-201ENST00000516142 244 ntBASIC0.58□□□□□ -2.32
SPG11Q96JI7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.58□□□□□ -2.32
SPG11Q96JI7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.58□□□□□ -2.32
SPG11Q96JI7 RLIMP2-201ENST00000427891 1563 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 RNU6-112P-201ENST00000363599 104 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 RNU6-923P-201ENST00000364753 107 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 SNORA8.3-201ENST00000384679 139 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SPG11Q96JI7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.57□□□□□ -2.32
SPG11Q96JI7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.57□□□□□ -2.32
SPG11Q96JI7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.57□□□□□ -2.32
SPG11Q96JI7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.57□□□□□ -2.32
SPG11Q96JI7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
SPG11Q96JI7 SYF2P1-201ENST00000550658 413 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 MIR4698-201ENST00000577795 80 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 LLPHP1-201ENST00000603571 367 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 AC135178.6-201ENST00000605314 398 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 AC009974.1-201ENST00000608881 455 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 AP001486.3-201ENST00000615334 372 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SPG11Q96JI7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
SPG11Q96JI7 AC007785.2-201ENST00000598627 1916 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 RNU6-1181P-201ENST00000384191 106 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 MIR153-2-201ENST00000385225 87 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 AC009296.1-201ENST00000443146 155 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 EIF4EP3-201ENST00000498782 656 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 SNORA62.5-201ENST00000516634 120 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.57□□□□□ -2.32
SPG11Q96JI7 OSBPL9P3-201ENST00000534523 595 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.57□□□□□ -2.32
SPG11Q96JI7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.57□□□□□ -2.32
SPG11Q96JI7 SNRPGP15-201ENST00000600149 222 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 RNA5SP108-201ENST00000605921 117 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.57□□□□□ -2.32
SPG11Q96JI7 AC106052.1-201ENST00000608029 497 ntBASIC0.57□□□□□ -2.32
SPG11Q96JI7 AL355497.1-201ENST00000406262 551 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 HMGN2P30-201ENST00000423237 256 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 AL353898.1-201ENST00000444055 238 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 AC010627.1-201ENST00000503819 1294 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 AC103851.1-201ENST00000506833 274 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.56□□□□□ -2.32
SPG11Q96JI7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.56□□□□□ -2.32
SPG11Q96JI7 AL355297.2-201ENST00000604792 129 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.56□□□□□ -2.32
SPG11Q96JI7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.56□□□□□ -2.32
SPG11Q96JI7 HSPE1P22-201ENST00000456856 327 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 AC010285.1-201ENST00000470580 392 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 RNU6-347P-201ENST00000516658 105 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 CYCSP26-201ENST00000534107 320 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 MIR4514-201ENST00000581410 57 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 AC008751.2-201ENST00000597885 980 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 AL109918.3-201ENST00000603072 338 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 AC021646.1-201ENST00000605469 484 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 AC009090.3-201ENST00000616553 565 ntBASIC0.56□□□□□ -2.32
SPG11Q96JI7 ZNF519P1-201ENST00000449011 1626 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 Y_RNA.552-201ENST00000384665 112 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 AC083875.1-201ENST00000419509 405 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.55□□□□□ -2.32
SPG11Q96JI7 AC098862.1-201ENST00000504991 413 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.55□□□□□ -2.32
SPG11Q96JI7 AC073569.3-201ENST00000619055 682 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 AC013470.4-201ENST00000619978 986 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.55□□□□□ -2.32
SPG11Q96JI7 CIR1P3-201ENST00000405137 479 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.55□□□□□ -2.32
SPG11Q96JI7 AL353689.1-201ENST00000438895 199 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 MTND5P14-201ENST00000441481 1267 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 AL500527.1-201ENST00000448532 255 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.55□□□□□ -2.32
SPG11Q96JI7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SPG11Q96JI7 OR5H4P-201ENST00000510851 923 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SPG11Q96JI7 OR5B19P-201ENST00000531766 928 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 AL160236.1-201ENST00000556317 195 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 MIR4658-201ENST00000584344 65 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms