Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.83□□□□□ -1.96
VMP1Q96GC9 S100A11P2-201ENST00000467589 312 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 RPL9P33-201ENST00000484311 566 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 MTND1P3-201ENST00000484956 952 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.83□□□□□ -1.96
VMP1Q96GC9 RNU2-10P-201ENST00000516375 211 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 AC009812.2-201ENST00000517657 457 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.83□□□□□ -1.96
VMP1Q96GC9 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.83□□□□□ -1.96
VMP1Q96GC9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.83□□□□□ -1.96
VMP1Q96GC9 AC007954.1-201ENST00000554198 494 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 MIR5571-201ENST00000577998 113 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 AL365204.3-201ENST00000612448 685 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 AC010678.1-201ENST00000614118 713 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 AL391262.2-201ENST00000622466 494 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.83□□□□□ -1.96
VMP1Q96GC9 RNY4P16-201ENST00000364768 94 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 MIR524-201ENST00000385242 87 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 MIR301A-201ENST00000385261 86 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 Z98742.2-201ENST00000431564 187 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 RPS27AP9-201ENST00000477681 438 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VMP1Q96GC9 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 RNU6-581P-201ENST00000516214 105 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 MRPS36P3-201ENST00000519284 130 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 AC022616.6-201ENST00000520479 119 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 AC106782.4-201ENST00000568264 210 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 MIR4782-201ENST00000577987 79 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.82□□□□□ -1.96
VMP1Q96GC9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 PISRT1-201ENST00000626175 531 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 AC093591.3-201ENST00000634516 308 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 AL512643.1-201ENST00000635735 524 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 Z99571.1-201ENST00000636677 394 ntBASIC2.82□□□□□ -1.96
VMP1Q96GC9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.81□□□□□ -1.96
VMP1Q96GC9 AL365361.1-201ENST00000566942 3481 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 RNU6-511P-201ENST00000363496 107 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 RNU5E-6P-201ENST00000365574 115 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VMP1Q96GC9 RNU1-52P-201ENST00000384190 164 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
VMP1Q96GC9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.81□□□□□ -1.96
VMP1Q96GC9 RNA5SP274-201ENST00000410484 108 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 RNU6-920P-201ENST00000410926 92 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AL451074.5-201ENST00000415894 435 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.81□□□□□ -1.96
VMP1Q96GC9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.81□□□□□ -1.96
VMP1Q96GC9 BX276092.3-201ENST00000424182 230 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AC019097.1-201ENST00000424783 735 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 RPL35AP12-201ENST00000425362 338 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AC022018.1-201ENST00000430685 241 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.81□□□□□ -1.96
VMP1Q96GC9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.81□□□□□ -1.96
VMP1Q96GC9 AC118469.1-201ENST00000442943 488 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AL441985.1-201ENST00000457727 251 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.81□□□□□ -1.96
VMP1Q96GC9 LINC00888-204ENST00000487386 421 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AC112204.1-201ENST00000502591 103 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 RNU6-1092P-201ENST00000516955 87 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AC107934.1-201ENST00000522215 217 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AC011979.2-201ENST00000527568 352 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AC022080.3-201ENST00000544433 482 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 PCMTD1P2-201ENST00000565017 355 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 ROCK1P1-201ENST00000573767 549 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AC069294.1-201ENST00000608397 350 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 Z99129.2-201ENST00000619967 314 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 MTND5P42-201ENST00000637720 498 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AC104454.1-201ENST00000421341 1401 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 TEX21P-201ENST00000447107 1476 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 AL359854.1-201ENST00000614203 1594 ntBASIC2.81□□□□□ -1.96
VMP1Q96GC9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VMP1Q96GC9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VMP1Q96GC9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.8□□□□□ -1.96
VMP1Q96GC9 ASNSP3-201ENST00000451989 1306 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC073325.2-201ENST00000339545 159 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 SMIM11P1-201ENST00000369586 178 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 HMGB3P12-201ENST00000438745 556 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.8□□□□□ -1.96
VMP1Q96GC9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC092001.1-201ENST00000453012 261 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 SSXP1-201ENST00000453640 473 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.8□□□□□ -1.96
VMP1Q96GC9 RPL21P41-201ENST00000459863 264 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC080013.2-201ENST00000460866 323 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms