Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MIR3149-201ENST00000584629 83 ntBASIC4.56□□□□□ -1.68
DDX11Q96FC9 IGHV3-29-201ENST00000604817 344 ntBASIC4.56□□□□□ -1.68
DDX11Q96FC9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.56□□□□□ -1.68
DDX11Q96FC9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX11Q96FC9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX11Q96FC9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
DDX11Q96FC9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
DDX11Q96FC9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DDX11Q96FC9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
DDX11Q96FC9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX11Q96FC9 MTND4P1-201ENST00000457501 1466 ntBASIC4.56□□□□□ -1.68
DDX11Q96FC9 MTND5P19-201ENST00000424872 1794 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX11Q96FC9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
DDX11Q96FC9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
DDX11Q96FC9 Y_RNA.482-201ENST00000384377 111 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 RNU6-1106P-201ENST00000390845 107 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 SNORA3.3-201ENST00000408712 125 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 RN7SKP177-201ENST00000410567 355 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX11Q96FC9 MTND1P17-201ENST00000448961 204 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.55□□□□□ -1.68
DDX11Q96FC9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX11Q96FC9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX11Q96FC9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX11Q96FC9 MTCO2P24-201ENST00000515611 426 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 RNU6-794P-201ENST00000517261 64 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX11Q96FC9 AP003122.3-201ENST00000526316 255 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX11Q96FC9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.55□□□□□ -1.68
DDX11Q96FC9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
DDX11Q96FC9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
DDX11Q96FC9 OR11H5P-201ENST00000554039 926 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX11Q96FC9 AF038458.1-201ENST00000588406 262 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 AC023043.2-201ENST00000589678 1026 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 AC012443.1-201ENST00000605605 231 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 AL357559.1-201ENST00000622228 274 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 U6.114-201ENST00000636407 96 ntBASIC4.55□□□□□ -1.68
DDX11Q96FC9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
DDX11Q96FC9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
DDX11Q96FC9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DDX11Q96FC9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DDX11Q96FC9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DDX11Q96FC9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 RNU6-989P-201ENST00000362756 107 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 SNORD51-201ENST00000384320 80 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 RNU6-985P-201ENST00000410182 104 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 RNA5SP44-201ENST00000410446 133 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 AL139396.1-201ENST00000421137 167 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 RPL7P46-201ENST00000425129 740 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 AC007967.1-201ENST00000455422 1159 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 AC004801.2-202ENST00000463559 283 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 TRBV1-201ENST00000476502 284 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 RPS27P27-201ENST00000498779 255 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 RNU6-976P-201ENST00000516086 111 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 RNU6-123P-201ENST00000516163 102 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 RNU6-1213P-201ENST00000517075 94 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 RN7SKP295-201ENST00000517264 153 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 AP000763.2-201ENST00000540641 163 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 MIR4680-201ENST00000580906 66 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 MIR3944-201ENST00000581277 108 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 AC007792.1-201ENST00000623023 402 ntBASIC4.54□□□□□ -1.68
DDX11Q96FC9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
DDX11Q96FC9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.54□□□□□ -1.68
DDX11Q96FC9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX11Q96FC9 AC006504.1-201ENST00000562493 3666 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.53□□□□□ -1.68
DDX11Q96FC9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX11Q96FC9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX11Q96FC9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DDX11Q96FC9 Y_RNA.5-201ENST00000362334 102 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 RNU6-1078P-201ENST00000364522 103 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 SNORA73.2-201ENST00000364946 201 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
DDX11Q96FC9 EIF4E2P1-201ENST00000393781 255 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 AL360182.1-201ENST00000397433 468 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.53□□□□□ -1.68
DDX11Q96FC9 POLHP1-201ENST00000411806 470 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 RPS12P24-201ENST00000412619 387 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 ATG3P1-201ENST00000419507 911 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 RAC1P6-201ENST00000423911 575 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 YME1L1P1-201ENST00000429435 297 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 FTH1P6-201ENST00000430768 320 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 USP9YP7-201ENST00000436723 430 ntBASIC4.53□□□□□ -1.68
DDX11Q96FC9 TXNP1-201ENST00000441872 371 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms