Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RN7SL93P-201ENST00000463035 293 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AL133162.1-201ENST00000463228 453 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 RPL21P104-201ENST00000464143 478 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 RN7SL542P-201ENST00000467147 294 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AL160314.1-201ENST00000490836 438 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 RNU2-69P-201ENST00000516061 100 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 RNU6-1256P-201ENST00000516539 103 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 Y_RNA.691-201ENST00000516611 103 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 RNA5SP291-201ENST00000517222 105 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AL355375.2-201ENST00000574825 175 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AL356055.1-201ENST00000602528 446 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AL353621.2-201ENST00000605340 133 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 BRDTP1-201ENST00000605735 677 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AC005344.1-201ENST00000613391 459 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AC090574.1-201ENST00000623186 233 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 MTND1P37-201ENST00000636562 264 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AC008568.2-201ENST00000623862 2313 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 HSPA8P4-201ENST00000511877 1920 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 HSPA8P1-201ENST00000425843 1833 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 NCAPGP1-201ENST00000505112 1814 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 RNU6-50P-201ENST00000362356 103 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 RNA5SP322-201ENST00000363617 119 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 Y_RNA.167-201ENST00000363735 109 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 RNU6-512P-201ENST00000364438 103 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 Y_RNA.301-201ENST00000364990 103 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 RNU1-89P-201ENST00000384592 164 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 AL139247.1-201ENST00000422768 325 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 AC017083.1-201ENST00000428093 483 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 AC007389.2-201ENST00000434630 306 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 RPL21P41-201ENST00000459863 264 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 DYNLL1P5-201ENST00000467158 270 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 RPL31P60-201ENST00000478450 367 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 SNORA70.16-201ENST00000516390 95 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 OR5D17P-201ENST00000531492 978 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 AP000889.2-201ENST00000532684 490 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 ATP1B3P1-201ENST00000605365 821 ntBASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
CTHRC1Q96CG8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AL161912.2-201ENST00000565707 3007 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 RNU6-254P-201ENST00000363377 107 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 Y_RNA.184-201ENST00000363884 108 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 RNU6-371P-201ENST00000364283 108 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 RNU6-45P-201ENST00000384471 107 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 Y_RNA.534-201ENST00000384599 112 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 MIR554-201ENST00000384874 96 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AL139397.2-201ENST00000404529 772 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 RPS4XP7-201ENST00000406274 780 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 RN7SKP156-201ENST00000410308 342 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 RPL21P90-201ENST00000415692 466 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AL445584.1-201ENST00000431451 330 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AC236972.2-201ENST00000434979 310 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 HMGB3P11-201ENST00000440127 604 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 RNU7-66P-201ENST00000459469 62 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AP002812.1-201ENST00000495378 474 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 HMGN1P13-201ENST00000505795 138 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 TBCAP3-201ENST00000512475 312 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 RNU2-58P-201ENST00000516403 183 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 RNA5SP309-201ENST00000516670 106 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AP001804.3-201ENST00000525146 880 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AC090115.3-201ENST00000553218 849 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 MTCO3P23-201ENST00000561363 289 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 MIR1254-2-201ENST00000579553 63 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AC098826.3-201ENST00000603823 466 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AC113139.1-201ENST00000605049 239 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AC245389.1-201ENST00000605141 529 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 DUSP12P1-201ENST00000612874 516 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AC022418.1-201ENST00000624118 445 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms