Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 CASC19-280ENST00000642102 1351 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 Y_RNA.88-201ENST00000363029 99 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 RNU6-288P-201ENST00000363690 104 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 RNU6-903P-201ENST00000391270 109 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 RNU6-876P-201ENST00000391295 104 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AL357075.1-201ENST00000404107 726 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 RNU4-46P-201ENST00000410818 138 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 RN7SKP284-201ENST00000411002 343 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 RNU6-373P-201ENST00000411247 98 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 RN7SKP53-201ENST00000411337 315 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AL109913.1-201ENST00000421173 514 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 SNRPFP3-201ENST00000457792 225 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 SNRPGP3-201ENST00000469405 227 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 RPL31P60-201ENST00000478450 367 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 RPS29P25-201ENST00000481709 171 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 EIF4EP3-201ENST00000498782 656 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 RNU4-29P-201ENST00000515943 174 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 RNU6-123P-201ENST00000516163 102 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 Y_RNA.689-201ENST00000516589 107 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 MIR4672-201ENST00000583126 81 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AL670379.4-201ENST00000605279 254 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AL008636.1-201ENST00000625038 1018 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AC024614.3-201ENST00000637860 256 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AC007656.2-201ENST00000624902 4547 ntBASIC3.82□□□□□ -1.8
TRIM43Q96BQ3 AL356274.2-201ENST00000624379 3752 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 IPO8P1-201ENST00000455509 3109 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AL139276.1-201ENST00000311910 1001 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RPL7P26-201ENST00000333817 754 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RNA5SP126-201ENST00000365092 109 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 Y_RNA.390-201ENST00000383932 102 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RNU6-14P-201ENST00000384630 106 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AL606923.1-201ENST00000406616 190 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RNA5SP111-201ENST00000411386 101 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC022028.1-201ENST00000412054 408 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RPL30P2-201ENST00000414021 291 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 BTF3L4P3-201ENST00000418879 476 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AL591212.2-201ENST00000433923 257 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 HMGB1P12-201ENST00000438594 598 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC025750.2-201ENST00000442609 450 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AL118520.1-201ENST00000450770 291 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC087588.1-201ENST00000462203 316 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RPL23AP62-201ENST00000463396 453 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RPL21P8-201ENST00000465083 535 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 TRBV1-201ENST00000476502 284 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RPS4XP13-201ENST00000483219 789 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RPL7P47-201ENST00000497299 556 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RBBP4P6-201ENST00000508098 202 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC025465.4-201ENST00000513422 638 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AP005435.4-201ENST00000529514 284 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC015917.1-201ENST00000579654 510 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC008521.1-201ENST00000587471 187 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC128687.2-201ENST00000609657 566 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RMST_3.1-201ENST00000611651 109 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC034102.8-201ENST00000615146 484 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AP003355.3-201ENST00000623465 114 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 Z83843.1-201ENST00000604070 3685 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 AC103710.2-202ENST00000641454 2853 ntBASIC3.81□□□□□ -1.8
TRIM43Q96BQ3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AL354685.2-201ENST00000448218 1447 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms