Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.58□□□□□ -1.68
BRF1Q92994 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.58□□□□□ -1.68
BRF1Q92994 MIR2053-201ENST00000459295 91 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 AC104472.2-201ENST00000469035 601 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.58□□□□□ -1.68
BRF1Q92994 AC026782.1-201ENST00000512952 449 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 RNU6-1332P-201ENST00000516666 104 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 AC008489.1-201ENST00000524271 483 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.58□□□□□ -1.68
BRF1Q92994 AL117187.1-201ENST00000555482 181 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
BRF1Q92994 SNORD84-203ENST00000584275 78 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.58□□□□□ -1.68
BRF1Q92994 AC018462.2-201ENST00000605375 395 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 AC007390.2-201ENST00000606229 3803 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 PISRT1.1-201ENST00000616930 107 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 AC006065.5-201ENST00000623427 349 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 MIR6715B-201ENST00000637172 77 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRF1Q92994 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRF1Q92994 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
BRF1Q92994 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.58□□□□□ -1.68
BRF1Q92994 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
BRF1Q92994 AL049641.1-201ENST00000441055 1948 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 AC074029.4-201ENST00000624796 1859 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
BRF1Q92994 AL356489.2-201ENST00000566968 3528 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRF1Q92994 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRF1Q92994 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.57□□□□□ -1.68
BRF1Q92994 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
BRF1Q92994 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.57□□□□□ -1.68
BRF1Q92994 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
BRF1Q92994 RNU6-890P-201ENST00000384121 107 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 RNU6-45P-201ENST00000384471 107 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 SNORA75.6-201ENST00000391318 127 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 RNU6-985P-201ENST00000410182 104 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 RNU6-1050P-201ENST00000410388 107 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 MCFD2P1-201ENST00000417812 300 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 MTATP6P4-201ENST00000427725 675 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.57□□□□□ -1.68
BRF1Q92994 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF1Q92994 RNU1-54P-201ENST00000517181 120 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 RNU6-840P-201ENST00000517275 65 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
BRF1Q92994 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF1Q92994 AC090877.1-201ENST00000561418 344 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 AC120057.2-201ENST00000571520 271 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 MIR4680-201ENST00000580906 66 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 AC138305.3-201ENST00000624988 240 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 RNA5SP196-201ENST00000625967 102 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
BRF1Q92994 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
BRF1Q92994 MTND5P30-201ENST00000452896 1731 ntBASIC4.57□□□□□ -1.68
BRF1Q92994 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRF1Q92994 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRF1Q92994 MTND4P1-201ENST00000457501 1466 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRF1Q92994 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF1Q92994 AC009812.4-201ENST00000569134 1805 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF1Q92994 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.56□□□□□ -1.68
BRF1Q92994 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRF1Q92994 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF1Q92994 RNA5SP443-201ENST00000363083 132 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 RNU6-1309P-201ENST00000363305 108 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 RNA5SP283-201ENST00000365604 119 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 Y_RNA.463-201ENST00000384271 102 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 SNORA36C-201ENST00000384289 132 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 Y_RNA.480-201ENST00000384364 102 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 RNU6-95P-201ENST00000384697 107 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 RPS4XP7-201ENST00000406274 780 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.56□□□□□ -1.68
BRF1Q92994 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.56□□□□□ -1.68
BRF1Q92994 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.56□□□□□ -1.68
BRF1Q92994 AL590632.1-201ENST00000424289 371 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.56□□□□□ -1.68
BRF1Q92994 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.56□□□□□ -1.68
BRF1Q92994 VWA8P1-201ENST00000510889 176 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 ERHP1-201ENST00000523006 310 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF1Q92994 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.56□□□□□ -1.68
BRF1Q92994 AC026371.1-201ENST00000551867 419 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 PARP1P2-201ENST00000556806 195 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 HMGB3P26-201ENST00000560051 582 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.56□□□□□ -1.68
BRF1Q92994 AC012119.1-201ENST00000603184 222 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 MIR6810-201ENST00000622701 70 ntBASIC4.56□□□□□ -1.68
BRF1Q92994 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.56□□□□□ -1.68
BRF1Q92994 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.56□□□□□ -1.68
BRF1Q92994 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
BRF1Q92994 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRF1Q92994 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.56□□□□□ -1.68
BRF1Q92994 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRF1Q92994 SDAD1P2-201ENST00000441308 2028 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF1Q92994 Z73965.1-201ENST00000623412 2297 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms