Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RNU6-551P-201ENST00000516661 103 ntBASIC1.82□□□□□ -2.12
TOPBP1Q92547 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.82□□□□□ -2.12
TOPBP1Q92547 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.82□□□□□ -2.12
TOPBP1Q92547 AC011260.1-201ENST00000578420 472 ntBASIC1.82□□□□□ -2.12
TOPBP1Q92547 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.82□□□□□ -2.12
TOPBP1Q92547 GAS5-AS1-201ENST00000602767 694 ntBASIC1.82□□□□□ -2.12
TOPBP1Q92547 AP001033.2-201ENST00000609701 1003 ntBASIC1.82□□□□□ -2.12
TOPBP1Q92547 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TOPBP1Q92547 TXNP7-201ENST00000406296 293 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 AC074117.2-201ENST00000417130 397 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.81□□□□□ -2.12
TOPBP1Q92547 AL136380.1-201ENST00000447970 162 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 MTCO3P2-201ENST00000457365 171 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 AC104164.3-201ENST00000467363 1258 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.81□□□□□ -2.12
TOPBP1Q92547 BPTFP1-201ENST00000579209 492 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 UCA1.1-201ENST00000620952 75 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TOPBP1Q92547 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
TOPBP1Q92547 AC008669.1-201ENST00000565823 2178 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TOPBP1Q92547 HMGB1P5-201ENST00000255320 642 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 SNORA51.6-201ENST00000384151 125 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.81□□□□□ -2.12
TOPBP1Q92547 RPL7L1P10-201ENST00000427790 463 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 IFNA20P-201ENST00000436840 528 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 RNF2P1-201ENST00000442955 1010 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.81□□□□□ -2.12
TOPBP1Q92547 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.81□□□□□ -2.12
TOPBP1Q92547 MTND2P6-201ENST00000455337 1030 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.81□□□□□ -2.12
TOPBP1Q92547 RNA5SP471-201ENST00000516971 106 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 CYP3A137P-201ENST00000562436 69 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 MIR3973-201ENST00000579824 107 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 AL163051.2-201ENST00000618976 735 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.81□□□□□ -2.12
TOPBP1Q92547 AC009318.4-201ENST00000620496 486 ntBASIC1.81□□□□□ -2.12
TOPBP1Q92547 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.81□□□□□ -2.12
TOPBP1Q92547 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.81□□□□□ -2.12
TOPBP1Q92547 TPTE2P4-201ENST00000258589 1605 ntBASIC1.8□□□□□ -2.12
TOPBP1Q92547 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TOPBP1Q92547 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TOPBP1Q92547 DEFB108F-201ENST00000344638 222 ntBASIC1.8□□□□□ -2.12
TOPBP1Q92547 RNU1-105P-201ENST00000363470 161 ntBASIC1.8□□□□□ -2.12
TOPBP1Q92547 SNORA70.7-201ENST00000384159 133 ntBASIC1.8□□□□□ -2.12
TOPBP1Q92547 AL121978.1-201ENST00000402778 359 ntBASIC1.8□□□□□ -2.12
TOPBP1Q92547 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.8□□□□□ -2.12
TOPBP1Q92547 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.8□□□□□ -2.12
TOPBP1Q92547 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.8□□□□□ -2.12
TOPBP1Q92547 DEFB108D-201ENST00000527787 222 ntBASIC1.8□□□□□ -2.12
TOPBP1Q92547 AC090897.2-201ENST00000581715 130 ntBASIC1.8□□□□□ -2.12
TOPBP1Q92547 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.8□□□□□ -2.12
TOPBP1Q92547 MFSD8-213ENST00000641134 1327 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 MTND5P11-201ENST00000511037 1812 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 RNU2-47P-201ENST00000410649 186 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 AL590233.1-201ENST00000430017 456 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.79□□□□□ -2.12
TOPBP1Q92547 UBE2FP3-201ENST00000436366 524 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 RAC1P7-201ENST00000445367 377 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 AL929288.2-201ENST00000446368 407 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TOPBP1Q92547 RNU6-420P-201ENST00000458780 107 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.79□□□□□ -2.12
TOPBP1Q92547 AC084024.2-201ENST00000503480 791 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 AC114801.2-201ENST00000503825 781 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 AC025768.1-201ENST00000510057 267 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.79□□□□□ -2.12
TOPBP1Q92547 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
TOPBP1Q92547 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TOPBP1Q92547 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.79□□□□□ -2.12
TOPBP1Q92547 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.79□□□□□ -2.12
TOPBP1Q92547 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.79□□□□□ -2.12
TOPBP1Q92547 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.79□□□□□ -2.12
TOPBP1Q92547 AL022578.1-201ENST00000439330 1433 ntBASIC1.79□□□□□ -2.12
TOPBP1Q92547 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TOPBP1Q92547 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TOPBP1Q92547 RNU4-38P-201ENST00000364472 129 ntBASIC1.78□□□□□ -2.12
TOPBP1Q92547 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 EBAG9P1-201ENST00000418955 543 ntBASIC1.78□□□□□ -2.12
TOPBP1Q92547 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 AL139109.1-201ENST00000455491 297 ntBASIC1.78□□□□□ -2.12
TOPBP1Q92547 HAR1A.1-201ENST00000459583 118 ntBASIC1.78□□□□□ -2.12
TOPBP1Q92547 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 RNA5SP395-201ENST00000516567 118 ntBASIC1.78□□□□□ -2.12
TOPBP1Q92547 RNA5SP337-201ENST00000517007 109 ntBASIC1.78□□□□□ -2.12
TOPBP1Q92547 AC103833.1-201ENST00000517442 172 ntBASIC1.78□□□□□ -2.12
TOPBP1Q92547 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 AC090616.3-201ENST00000582184 217 ntBASIC1.78□□□□□ -2.12
TOPBP1Q92547 MIR3117-201ENST00000584034 78 ntBASIC1.78□□□□□ -2.12
TOPBP1Q92547 7SK.7-201ENST00000603504 247 ntBASIC1.78□□□□□ -2.12
TOPBP1Q92547 AC112191.3-201ENST00000604371 277 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms