Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 RNU6-864P-201ENST00000516256 108 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AC106782.4-201ENST00000568264 210 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 MIR3160-1-201ENST00000577972 85 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 MIR4286-201ENST00000580651 93 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AC135507.2-201ENST00000612443 309 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 AC104237.2-201ENST00000612456 443 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 MTND1P37-201ENST00000636562 264 ntBASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4AQ8WYN0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 SNORA7.2-201ENST00000364446 145 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 RNU6-1013P-201ENST00000384180 107 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 Y_RNA.460-201ENST00000384255 102 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 Y_RNA.474-201ENST00000384341 102 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 RN7SKP53-201ENST00000411337 315 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 HMGB3P11-201ENST00000440127 604 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 PRDX3P3-201ENST00000447765 522 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC233279.1-201ENST00000455300 423 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 RPL23AP31-201ENST00000456160 467 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 HMGB3P30-201ENST00000457863 606 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AP001086.1-201ENST00000494882 321 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC110768.1-201ENST00000509222 400 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 RNU6-189P-201ENST00000516120 101 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 RNU6-927P-201ENST00000516199 100 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC011602.1-201ENST00000546484 331 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 TGIF1P1-201ENST00000558095 802 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 MED28P6-201ENST00000558776 231 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 HSPE1P5-201ENST00000561489 272 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC007224.1-201ENST00000564410 144 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC022893.3-201ENST00000607665 437 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC103710.3-201ENST00000608157 948 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 Z82243.1-201ENST00000609432 473 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AL442067.2-201ENST00000614033 363 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC103705.1-201ENST00000619013 241 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AC090574.1-201ENST00000623186 233 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 AL133216.2-202ENST00000634512 349 ntBASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4AQ8WYN0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
ATG4AQ8WYN0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ATG4AQ8WYN0 SNORD113-7-201ENST00000363762 77 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 RNA5SP51-201ENST00000364750 119 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.399-201ENST00000383955 105 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 MIR514A1-201ENST00000385133 98 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 SNORD70.1-201ENST00000391007 85 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 EIF4E2P1-201ENST00000393781 255 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 RPS12P24-201ENST00000412619 387 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 NDUFA5P4-201ENST00000436704 385 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 AL049874.1-201ENST00000489560 388 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 AC078817.1-201ENST00000492623 435 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 AC078918.1-201ENST00000498515 228 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 HMGN1P13-201ENST00000505795 138 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 RNU2-27P-201ENST00000516185 142 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 MIR2276-201ENST00000516886 89 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 AP000763.2-201ENST00000540641 163 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 MIR5685-201ENST00000579080 79 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 AL050343.2-201ENST00000607338 280 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 U4.6-201ENST00000621618 127 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 C2orf27A-204ENST00000623058 969 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 AC112200.1-201ENST00000625015 234 ntBASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATG4AQ8WYN0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 HSPA8P4-201ENST00000511877 1920 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 OR4G2P-202ENST00000641004 1759 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 FRG1CP-201ENST00000358464 769 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms