Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.93□□□□□ -2.1
RTN4IP1Q8WWV3 AP000676.3-201ENST00000623299 569 ntBASIC1.93□□□□□ -2.1
RTN4IP1Q8WWV3 AL356266.1-201ENST00000623311 483 ntBASIC1.93□□□□□ -2.1
RTN4IP1Q8WWV3 AC073308.1-201ENST00000623696 305 ntBASIC1.93□□□□□ -2.1
RTN4IP1Q8WWV3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.93□□□□□ -2.1
RTN4IP1Q8WWV3 CTSLP2-204ENST00000629029 392 ntBASIC1.93□□□□□ -2.1
RTN4IP1Q8WWV3 AC008993.2-201ENST00000631744 806 ntBASIC1.93□□□□□ -2.1
RTN4IP1Q8WWV3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RTN4IP1Q8WWV3 AL049641.1-201ENST00000441055 1948 ntBASIC1.93□□□□□ -2.1
RTN4IP1Q8WWV3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
RTN4IP1Q8WWV3 CR848007.1-201ENST00000442354 1699 ntBASIC1.93□□□□□ -2.1
RTN4IP1Q8WWV3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 Y_RNA.18-201ENST00000362461 102 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RNU6-461P-201ENST00000364195 107 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 U3.12-201ENST00000364498 214 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RNU6-1035P-201ENST00000384477 107 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 Y_RNA.510-201ENST00000384511 114 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RNU6-1072P-201ENST00000384703 107 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RNU6-443P-201ENST00000384780 107 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RPL21P24-201ENST00000413752 448 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AL008629.1-201ENST00000438615 184 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AL445687.1-201ENST00000439946 251 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 MTND5P2-201ENST00000442927 1142 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 BMI1P1-201ENST00000445879 941 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 DPPA3P1-201ENST00000448050 469 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RPS15AP27-201ENST00000449183 343 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC011753.1-201ENST00000451001 220 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RPL12P25-201ENST00000455592 494 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RNU6-420P-201ENST00000458780 107 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC072039.1-201ENST00000477611 581 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC068587.2-201ENST00000478386 781 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC104435.1-201ENST00000483483 166 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC090096.1-201ENST00000489168 390 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RPS29P20-201ENST00000489592 171 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 EIF4EP3-201ENST00000498782 656 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 MRPS36P2-201ENST00000512569 299 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RNU6-1129P-201ENST00000515964 104 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RNU6-390P-201ENST00000516259 103 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 RNU6-64P-201ENST00000517119 105 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 COX6CP5-201ENST00000527162 228 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AP001646.1-201ENST00000527936 915 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AP000907.2-201ENST00000530827 353 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC021269.2-201ENST00000532318 330 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC027176.1-201ENST00000560204 514 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AP000403.1-201ENST00000603349 851 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC013476.2-201ENST00000614456 459 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 MTND1P37-201ENST00000636562 264 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC007336.1-201ENST00000576365 3828 ntBASIC1.92□□□□□ -2.1
RTN4IP1Q8WWV3 AC104454.1-201ENST00000421341 1401 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 CKAP2P1-201ENST00000555477 2049 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 Y_RNA.46-201ENST00000362695 102 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 RNU6-809P-201ENST00000384461 107 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 RPS20P2-201ENST00000402520 389 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AC092047.1-201ENST00000424997 240 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AL356867.1-201ENST00000429623 299 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AL714022.1-201ENST00000439897 151 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AC005094.1-201ENST00000440420 368 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AL049734.2-201ENST00000441066 616 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AP1S2P1-201ENST00000457344 379 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AC087588.1-201ENST00000462203 316 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AC116337.2-201ENST00000477662 156 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 MRPL42P6-201ENST00000486397 371 ntBASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RTN4IP1Q8WWV3 AC113155.1-201ENST00000511141 769 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms