Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC092326.2-201ENST00000624772 1561 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC006020.1-201ENST00000420179 1854 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNED1Q8TER0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SNED1Q8TER0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNED1Q8TER0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNED1Q8TER0 RNU6-115P-201ENST00000364310 107 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 RNU6-441P-201ENST00000384545 106 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 MIR181B1-201ENST00000385240 110 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 RPS15AP6-201ENST00000420703 385 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 BX276092.3-201ENST00000424182 230 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 MTCO1P20-201ENST00000425366 358 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 RPS15AP1-201ENST00000457423 391 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 NIPA2P2-201ENST00000496376 1083 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 POU5F1P7-201ENST00000508759 541 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 MTND3P22-201ENST00000510932 243 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC025465.4-201ENST00000513422 638 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 LRRC34P2-201ENST00000514850 553 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 MTND1P35-201ENST00000526739 508 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 FAM92A1P1-201ENST00000528023 890 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC123904.3-201ENST00000547218 814 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 HMGB1P33-201ENST00000563485 527 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 AL158827.2-201ENST00000602494 330 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC112191.3-201ENST00000604371 277 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC008277.2-201ENST00000605196 797 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC097468.3-201ENST00000607956 456 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AL691447.3-201ENST00000635020 330 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC110994.2-201ENST00000635481 492 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC138915.3-201ENST00000562908 1389 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC117529.2-201ENST00000512159 2068 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 AC004925.1-201ENST00000624256 2706 ntBASIC3.2□□□□□ -1.9
SNED1Q8TER0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SNED1Q8TER0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNED1Q8TER0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 RNY4P34-201ENST00000364779 95 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 RNU6-116P-201ENST00000384042 109 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 RNU6-533P-201ENST00000384144 107 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 RNU6-780P-201ENST00000391030 104 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 RNU4-55P-201ENST00000410731 137 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 USP9YP27-201ENST00000418455 438 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC092634.6-201ENST00000418558 192 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 Z98742.3-201ENST00000418637 326 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 SRIP2-201ENST00000428470 166 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AL358934.1-201ENST00000432346 324 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 HMGB1P18-201ENST00000438801 619 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 PGBD4P3-201ENST00000440731 581 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 HMGN2P16-201ENST00000456802 261 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 snoU13.23-201ENST00000458863 104 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 RPL23AP55-201ENST00000498163 452 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC010493.1-201ENST00000513479 292 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNED1Q8TER0 RNU6-150P-201ENST00000516237 95 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 Y_RNA.676-201ENST00000516393 96 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC013828.2-201ENST00000532487 235 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AK6P1-201ENST00000540219 478 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 AP001486.2-201ENST00000561652 5113 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC005046.1-201ENST00000608515 625 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNED1Q8TER0 AC126177.8-201ENST00000618339 1015 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.19□□□□□ -1.9
SNED1Q8TER0 FARSBP1-201ENST00000435808 1778 ntBASIC3.19□□□□□ -1.9
SNED1Q8TER0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNED1Q8TER0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNED1Q8TER0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms