Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RNU6-595P-201ENST00000363944 107 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 U8.8-201ENST00000365399 135 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 RNU6-937P-201ENST00000384325 106 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 AL079342.1-201ENST00000401460 267 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 RNU6-257P-201ENST00000410238 98 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 RN7SKP159-201ENST00000410657 292 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 AC092809.3-201ENST00000415453 231 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 AC234779.1-201ENST00000425910 285 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 AC011998.1-201ENST00000433403 117 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 BX679664.1-201ENST00000434429 253 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 PHBP16-201ENST00000446318 950 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 RPS17P13-201ENST00000448974 407 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 RPL10P17-201ENST00000453852 316 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 RN7SL303P-201ENST00000469773 251 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 RN7SKP122-201ENST00000515923 296 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 RNA5SP497-201ENST00000516081 97 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 RNY3P16-201ENST00000516338 101 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 RNU6-844P-201ENST00000517175 102 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 MIR4697-201ENST00000582977 78 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 MIR3138-201ENST00000585238 82 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 FP236240.3-201ENST00000623061 327 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 ZNF299P-201ENST00000406845 1804 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 MIR331-201ENST00000362302 94 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 Y_RNA.272-201ENST00000364696 102 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 RNU1-63P-201ENST00000383902 164 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 Y_RNA.435-201ENST00000384095 112 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 Y_RNA.488-201ENST00000384403 102 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AL591034.2-201ENST00000402839 359 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 SNORA11F-201ENST00000408237 128 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 RNA5SP494-201ENST00000410653 129 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 HSPD1P21-201ENST00000436541 245 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC097462.2-201ENST00000504623 481 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 RNU5F-8P-201ENST00000515941 111 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 RNA5SP272-201ENST00000516095 111 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC136624.4-201ENST00000573044 370 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 MIR5696-201ENST00000578474 85 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 MIR4308-201ENST00000580634 81 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC098826.3-201ENST00000603823 466 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC113403.1-201ENST00000604910 193 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AL590392.1-201ENST00000604960 446 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC114781.5-201ENST00000615297 108 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 uc_338.13-201ENST00000618243 179 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 AC091905.2-201ENST00000623143 306 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 MTND1P7-201ENST00000632801 297 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 MIR6830-201ENST00000636015 70 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 IGHVIII-44-202ENST00000636235 289 ntBASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
NEDD1Q8NHV4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NEDD1Q8NHV4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
NEDD1Q8NHV4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NEDD1Q8NHV4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEDD1Q8NHV4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEDD1Q8NHV4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEDD1Q8NHV4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEDD1Q8NHV4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.19□□□□□ -1.58
NEDD1Q8NHV4 SNORA70.2-201ENST00000364506 135 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms