Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 U8.14-201ENST00000390843 143 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AL590084.2-201ENST00000401481 382 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 RN7SKP32-201ENST00000410167 303 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 RPS24P7-201ENST00000416921 246 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 BX119904.4-201ENST00000424402 301 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 SNRPEP9-201ENST00000436794 238 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AL353689.1-201ENST00000438895 199 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 RPL23AP42-201ENST00000471152 471 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 TRBV12-1-201ENST00000479785 344 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 SNRPGP18-201ENST00000553000 214 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 ANP32BP3-201ENST00000559213 706 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AC104072.1-201ENST00000568817 668 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AP001269.3-201ENST00000588718 329 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 SNRPGP19-201ENST00000603826 189 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AL138963.2-201ENST00000605137 226 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AC116312.1-201ENST00000606841 314 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AC007038.2-201ENST00000608095 740 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 AC084824.5-201ENST00000612009 413 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 U2.21-201ENST00000637295 81 ntBASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CLHC1Q8NHS4 ZNF702P-202ENST00000434269 1966 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 RNU6-97P-201ENST00000363387 104 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 SNORA64-201ENST00000384674 134 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 AL135786.1-201ENST00000415892 214 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 COX7BP2-201ENST00000437976 242 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 HMGB3P17-201ENST00000504195 649 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 MRPS33P3-201ENST00000513456 322 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 AP003168.1-201ENST00000530091 307 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 OR6C7P-201ENST00000547875 934 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 AC026464.5-201ENST00000562497 722 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 AL121652.1-201ENST00000608851 448 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 AC124016.2-201ENST00000610058 665 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 AC010133.1-201ENST00000615809 842 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 AL590808.1-201ENST00000618696 141 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
CLHC1Q8NHS4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AC103710.2-202ENST00000641454 2853 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 RNU4-51P-201ENST00000364206 140 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 RNU6-1207P-201ENST00000384343 107 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 MIR147B-201ENST00000390185 80 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AL356421.1-201ENST00000403255 413 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 RNU2-72P-201ENST00000411175 163 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 MTND4P3-201ENST00000417829 541 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 ZNF90P2-204ENST00000419323 1075 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 Z98742.2-201ENST00000431564 187 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 DNAJC19P4-201ENST00000440115 345 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 MTND5P14-201ENST00000441481 1267 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 RPL23AP3-201ENST00000453844 468 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 RNU2-44P-201ENST00000516795 194 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 RNA5SP290-201ENST00000517133 127 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AC005832.3-201ENST00000537929 631 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AC126365.2-201ENST00000580630 379 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 RPP40P2-201ENST00000603596 712 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AL139344.1-201ENST00000605228 195 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AC024060.1-201ENST00000607052 494 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AC004908.2-201ENST00000609090 574 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AC009237.15-201ENST00000610252 501 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 TUG1_2.1-201ENST00000614234 87 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AC024581.2-201ENST00000619986 252 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms