Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC123767.1-202ENST00000620407 817 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 AC104985.3-201ENST00000623479 597 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 AL049641.1-201ENST00000441055 1948 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 RNU6-952P-201ENST00000391164 108 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 MIR1323-201ENST00000408090 73 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 RPL19P1-201ENST00000411635 428 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 WARS2P1-201ENST00000429678 537 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 RNF2P1-201ENST00000442955 1010 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 RNU1-123P-201ENST00000458950 160 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 RPL21P39-201ENST00000463605 483 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 AC025033.1-201ENST00000463883 194 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 AC011979.1-201ENST00000472300 483 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 RPL21P93-201ENST00000480465 489 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 AC093591.1-201ENST00000491435 481 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 SNORA19.3-201ENST00000516165 130 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 SNORA31.22-201ENST00000517204 135 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 BNIP3P27-201ENST00000599991 412 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 AC019159.1-201ENST00000605094 187 ntBASIC2.35□□□□□ -2.03
COL22A1Q8NFW1 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.03
COL22A1Q8NFW1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL22A1Q8NFW1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL22A1Q8NFW1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
COL22A1Q8NFW1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL22A1Q8NFW1 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.34□□□□□ -2.03
COL22A1Q8NFW1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL22A1Q8NFW1 RNA5SP160-201ENST00000364866 120 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AL356421.1-201ENST00000403255 413 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 HMGB1P17-201ENST00000403495 628 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AL449283.1-202ENST00000418249 604 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 NDUFB4P7-201ENST00000423198 363 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AC093677.1-201ENST00000514414 678 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AP002748.2-201ENST00000528671 348 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AC087441.2-201ENST00000529141 262 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AC118942.1-201ENST00000529674 1035 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AC068135.2-201ENST00000569293 1028 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AL158163.2-201ENST00000619110 700 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AL138955.1-201ENST00000622881 1040 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 AC106858.1-201ENST00000637497 429 ntBASIC2.34□□□□□ -2.04
COL22A1Q8NFW1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AC008669.1-201ENST00000565823 2178 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 RNA5SP325-201ENST00000363756 130 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 RNU6-53P-201ENST00000365367 106 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 RNU6-637P-201ENST00000384050 107 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 RNU6-1207P-201ENST00000384343 107 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 Z85995.1-201ENST00000415547 335 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AC099548.1-201ENST00000421443 426 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 PPP1R11P2-201ENST00000423543 382 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AC007919.1-201ENST00000429380 217 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 MTCO2P25-201ENST00000447065 681 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 SSXP1-201ENST00000453640 473 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 RNU7-136P-201ENST00000458819 69 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 MTND1P16-201ENST00000465177 898 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AL121594.1-201ENST00000475906 575 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 SCARNA15.2-201ENST00000516409 127 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 OR6C7P-201ENST00000547875 934 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AC013553.2-201ENST00000604244 589 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AC090132.2-201ENST00000615881 347 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 DDX10P1-201ENST00000448545 1933 ntBASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL22A1Q8NFW1 AC007785.2-201ENST00000598627 1916 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 Y_RNA.327-201ENST00000365201 102 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 RNU6-516P-201ENST00000411381 104 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 UBE2V1P13-201ENST00000436983 439 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 TRGVB-201ENST00000453257 471 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 AC109486.1-201ENST00000486833 374 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 RNU6-150P-201ENST00000516237 95 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 RNU6-714P-201ENST00000516963 103 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 RPS3AP23-202ENST00000574601 686 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 MIR4448-201ENST00000584360 86 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 AL606834.3-201ENST00000602615 496 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 AC024560.3-201ENST00000608482 349 ntBASIC2.32□□□□□ -2.04
COL22A1Q8NFW1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms