Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 MFSD8-213ENST00000641134 1327 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 MIR758-201ENST00000390227 88 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 RPL23AP29-201ENST00000397284 453 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL590383.1-201ENST00000428602 75 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC104997.1-201ENST00000519761 717 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC008127.2-201ENST00000549925 1075 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC021851.1-201ENST00000608537 1082 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 HMGB1P24-202ENST00000615653 685 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC009032.1-201ENST00000617574 431 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 ZNF209P-201ENST00000593450 2304 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 RPL7L1P10-201ENST00000427790 463 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC004022.1-201ENST00000447766 1066 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 PRELID3BP4-201ENST00000515476 571 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 BPTFP1-201ENST00000579209 492 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC015688.2-201ENST00000584523 262 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL109918.3-201ENST00000603072 338 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL109933.3-201ENST00000619095 188 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AP003400.6-201ENST00000624698 740 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 U6.107-201ENST00000637108 79 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC110491.1-201ENST00000562191 2010 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 RNA5SP257-201ENST00000363023 116 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 SNORA27.3-201ENST00000364937 134 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 SNORD51-201ENST00000384320 80 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 MTND4LP10-201ENST00000435146 291 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 MTCO2P9-201ENST00000503214 694 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 SUMO2P14-201ENST00000604488 293 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 MIR338-201ENST00000636369 67 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 HSFY3P-201ENST00000444242 1191 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC015908.1-201ENST00000478739 476 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC107032.1-201ENST00000485945 480 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 SNORA31.25-201ENST00000517242 134 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AP001189.2-201ENST00000527320 189 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 MIR3126-201ENST00000577443 74 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC004775.1-201ENST00000607389 753 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 RNU1-72P-201ENST00000362976 153 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 RNU6-252P-201ENST00000363232 107 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 MIR1302-8-201ENST00000408342 128 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC026801.1-201ENST00000497178 464 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 SUMO2P6-201ENST00000505273 288 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 VN1R107P-201ENST00000601784 209 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL021997.1-201ENST00000605757 193 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC135507.1-201ENST00000607214 561 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 UCA1.1-201ENST00000620952 75 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC018630.2-201ENST00000534866 2403 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 Y_RNA.136-201ENST00000363444 102 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 MIR514A1-201ENST00000385133 98 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL035405.1-201ENST00000400795 710 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL139098.1-201ENST00000407291 389 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RNU6-920P-201ENST00000410926 92 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC007098.1-201ENST00000420122 367 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AMD1P1-201ENST00000457220 922 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RNU6-113P-201ENST00000516653 101 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL035411.2-201ENST00000604022 421 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 MIR502-201ENST00000606349 86 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC016542.1-201ENST00000608259 493 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 MIR8087-201ENST00000612745 78 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 CISD1P1-201ENST00000393907 327 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 SUMO2P12-201ENST00000405924 140 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 Z82210.1-201ENST00000440037 231 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms