Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 RNU4-29P-201ENST00000515943 174 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 RNU6-1178P-201ENST00000516674 107 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 RNU6-143P-201ENST00000516942 93 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 CYCSP30-201ENST00000546447 172 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 AC011602.1-201ENST00000546484 331 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 PARP1P2-201ENST00000556806 195 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 AL157871.3-201ENST00000557231 293 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 HMGB1P14-201ENST00000557424 591 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 MTCO3P24-201ENST00000572729 782 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 MIR3609-201ENST00000582661 80 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 AC010525.2-201ENST00000590920 195 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 AL020991.1-201ENST00000612314 373 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 SNORD39.4-201ENST00000620099 78 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 MIR3662-201ENST00000637030 95 ntBASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
DNAAF1Q8NEP3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AC058791.1-201ENST00000608412 3198 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 NACAP2-201ENST00000318548 624 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 RN7SKP280-201ENST00000364196 304 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 MIR301A-201ENST00000385261 86 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AL606923.1-201ENST00000406616 190 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 RNA5SP38-201ENST00000410750 119 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 RNU6-55P-201ENST00000411092 107 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 RNU6-954P-201ENST00000411355 107 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AL158156.1-201ENST00000422509 473 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AL158071.1-201ENST00000430315 461 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 MYL8P-204ENST00000431574 518 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 HMGB1P31-201ENST00000437242 427 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 HMGB3P11-201ENST00000440127 604 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 CALM1P1-201ENST00000442082 433 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AL360271.2-201ENST00000447710 161 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 RPS15AP27-201ENST00000449183 343 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AC010401.1-201ENST00000463867 348 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 RPL23AP11-201ENST00000475260 469 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 RPL30P14-201ENST00000482744 348 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 RPL32P34-201ENST00000486380 400 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 RPL38P4-201ENST00000502376 214 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AC009902.1-201ENST00000519351 183 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 PSMA2P1-201ENST00000526365 646 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AL118558.2-201ENST00000556294 238 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 MIR1273C-201ENST00000578669 77 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 uc_338.34-201ENST00000617467 174 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 U2.21-201ENST00000637295 81 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 AC005183.1-201ENST00000603687 1979 ntBASIC3.2□□□□□ -1.9
DNAAF1Q8NEP3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 GABRG2-229ENST00000641017 3628 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 OR4G1P-203ENST00000641984 1631 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 RNU6-715P-201ENST00000365204 103 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 Y_RNA.390-201ENST00000383932 102 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 MIR578-201ENST00000384828 96 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 RPL30P16-201ENST00000419341 429 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 SRIP2-201ENST00000428470 166 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 ATP5JP1-201ENST00000431631 322 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 H2AFZP6-201ENST00000444403 394 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 SCARNA18-201ENST00000459004 134 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 AC084357.1-201ENST00000473404 255 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 AC022493.1-201ENST00000492984 337 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 FCF1P3-201ENST00000496394 590 ntBASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.19□□□□□ -1.9
DNAAF1Q8NEP3 IGHV3-76-201ENST00000522465 295 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms