Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC115115.1-201ENST00000449927 248 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 AC107399.1-201ENST00000451226 265 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 SNORD97-201ENST00000459187 142 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RPS27AP1-201ENST00000475545 471 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-566P-201ENST00000516790 107 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-685P-201ENST00000517088 95 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 IGKV2-38-201ENST00000517443 247 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 DNAJC8P1-201ENST00000554535 372 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 AC016925.2-201ENST00000605108 242 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 MIR8058-201ENST00000615737 89 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 AL355365.1-201ENST00000616480 294 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 AC098657.3-201ENST00000620434 263 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 uc_338.22-201ENST00000622722 187 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 API5P2-201ENST00000397055 1498 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 TPTE2P4-201ENST00000258589 1605 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC007685.1-201ENST00000329806 452 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 SNORD9-201ENST00000362566 104 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.133-201ENST00000363428 110 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.135-201ENST00000363439 95 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-1284P-201ENST00000363701 100 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-1188P-201ENST00000363795 107 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.187-201ENST00000363918 113 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-432P-201ENST00000384196 109 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-550P-201ENST00000391057 101 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-1304P-201ENST00000411374 106 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 POLHP1-201ENST00000411806 470 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 MTND1P17-201ENST00000448961 204 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC004801.2-202ENST00000463559 283 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 RN7SL807P-201ENST00000470923 297 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 RPL7P42-201ENST00000481005 679 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC093303.1-201ENST00000514549 295 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-273P-201ENST00000516937 96 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 RNA5SP454-201ENST00000517231 127 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AL121576.1-201ENST00000556055 276 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC023043.2-201ENST00000589678 1026 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC012603.1-201ENST00000606424 528 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC010205.1-201ENST00000616668 449 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AL591424.2-201ENST00000617023 128 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC103705.1-201ENST00000619013 241 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 U6.114-201ENST00000636407 96 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AL773545.4-201ENST00000637262 310 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AL513478.4-201ENST00000641636 310 ntBASIC3.84□□□□□ -1.79
SLC44A3Q8N4M1 AC027287.1-201ENST00000553115 1453 ntBASIC3.84□□□□□ -1.8
SLC44A3Q8N4M1 PABPC1P7-201ENST00000413177 1513 ntBASIC3.84□□□□□ -1.8
SLC44A3Q8N4M1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.84□□□□□ -1.8
SLC44A3Q8N4M1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 RNU6-1252P-201ENST00000363054 104 ntBASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 U3.15-201ENST00000365398 212 ntBASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 RNU6-637P-201ENST00000384050 107 ntBASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 RNU6-1127P-201ENST00000384580 107 ntBASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 RNA5SP56-201ENST00000410277 118 ntBASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 RNA5SP306-201ENST00000411087 107 ntBASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 AC096664.2-201ENST00000411843 406 ntBASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 RPL37P10-201ENST00000412884 288 ntBASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 AC074085.1-201ENST00000413598 418 ntBASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC44A3Q8N4M1 FABP5P14-201ENST00000437273 393 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms