Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SNORA38-201ENST00000363946 132 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 RNU1-91P-201ENST00000364746 163 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 AC023141.4-201ENST00000412031 328 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 AL358075.3-201ENST00000426289 226 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 AC020550.1-201ENST00000447385 163 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 RPL12P25-201ENST00000455592 494 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 RPS27P21-201ENST00000486977 252 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 AC055855.1-201ENST00000489563 579 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 RPS29P20-201ENST00000489592 171 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 AC119751.5-201ENST00000514077 770 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 RNU5A-4P-201ENST00000516588 111 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 AF038458.1-201ENST00000588406 262 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 AC004852.3-201ENST00000614131 326 ntBASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 FAM133CP-201ENST00000332869 704 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 XGY1-201ENST00000381172 446 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 RNU1-73P-201ENST00000383971 164 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 RNU6-301P-201ENST00000384277 107 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 SNORA48.3-201ENST00000391081 134 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 U3.40-201ENST00000408706 208 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 LARP1BP3-201ENST00000437229 869 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC008481.1-201ENST00000463278 396 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 MRPS17P3-201ENST00000465453 385 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC128713.1-201ENST00000471495 306 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC104435.1-201ENST00000483483 166 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 LTV1P1-201ENST00000510683 1237 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 SNRPGP18-201ENST00000553000 214 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 MIR4293-201ENST00000584305 78 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC072039.2-201ENST00000608883 439 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC107294.1-201ENST00000609524 467 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AL355472.4-201ENST00000610233 626 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC013562.2-201ENST00000611632 603 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC079395.3-201ENST00000615161 484 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AL031601.2-202ENST00000622650 282 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC093591.3-201ENST00000634516 308 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 AC097655.1-201ENST00000635075 318 ntBASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC65Q8IXS2 CCT4P2-201ENST00000233836 1548 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 MTND5P6-201ENST00000422338 1798 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 MTND4P35-201ENST00000604257 1375 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 MIR449A-201ENST00000362113 91 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 RNA5SP88-201ENST00000365560 109 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 RNU4-52P-201ENST00000384209 138 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 SNORA51.11-201ENST00000384442 131 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 MIR767-201ENST00000390228 109 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC119751.3-201ENST00000399720 670 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 CCNG1P1-201ENST00000406783 885 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AL008987.1-201ENST00000415528 237 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 ZNF863P-201ENST00000426746 417 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC010153.1-201ENST00000432862 727 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC005094.1-201ENST00000440420 368 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 EEF1B2P7-201ENST00000451177 676 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC090515.1-201ENST00000465295 476 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC020699.1-201ENST00000505161 445 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 RNU6-927P-201ENST00000516199 100 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 RNU6-311P-201ENST00000516224 102 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 HMGN1P28-201ENST00000521340 364 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms