Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC011753.3-201ENST00000443436 406 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 RANP8-201ENST00000444720 713 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC022431.1-201ENST00000450941 438 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 RNU6-1037P-201ENST00000459571 107 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 RNY3P16-201ENST00000516338 101 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 RNU6-914P-201ENST00000516749 109 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AL590705.4-201ENST00000532209 134 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC027288.2-201ENST00000553028 243 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC105129.1-201ENST00000560250 297 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC233702.9-201ENST00000581528 203 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AL162424.1-201ENST00000602325 221 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC091895.1-201ENST00000624494 256 ntBASIC4.26□□□□□ -1.73
ATG4DQ86TL0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
ATG4DQ86TL0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC126323.6-202ENST00000568092 3511 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC007685.1-201ENST00000329806 452 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 RNU4-90P-201ENST00000362773 141 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 RNY3P4-201ENST00000384428 101 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 Y_RNA.497-201ENST00000384447 98 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 RN7SKP100-201ENST00000411258 284 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC063979.1-201ENST00000415539 377 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AL590139.1-201ENST00000416267 400 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 PIGFP3-201ENST00000441918 722 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 FHP1-201ENST00000442741 703 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 H2AFZP5-201ENST00000446960 382 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC073264.2-201ENST00000448886 166 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 RN7SL354P-201ENST00000469282 294 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC140059.1-201ENST00000489238 361 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 RNU6-1219P-201ENST00000516143 112 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC103783.1-201ENST00000520506 373 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AP006289.1-201ENST00000538089 277 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC091042.1-201ENST00000579213 173 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC209154.1-201ENST00000582156 337 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 MIR548AC-201ENST00000585049 88 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AP000346.3-201ENST00000622821 210 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 MFSD8-216ENST00000641147 4009 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG4DQ86TL0 AC107027.3-201ENST00000565095 3473 ntBASIC4.25□□□□□ -1.73
ATG4DQ86TL0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.24□□□□□ -1.73
ATG4DQ86TL0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ATG4DQ86TL0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
ATG4DQ86TL0 RNU6-1130P-201ENST00000365434 107 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 Y_RNA.405-201ENST00000383979 100 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 RNU6-44P-201ENST00000384045 107 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 Y_RNA.451-201ENST00000384200 100 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 Y_RNA.524-201ENST00000384564 100 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 RNU6-1179P-201ENST00000384667 107 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 Y_RNA.561-201ENST00000384694 100 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 RNU6-817P-201ENST00000391083 104 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 RNU6-131P-201ENST00000391144 107 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 MIR921-201ENST00000401133 56 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.24□□□□□ -1.73
ATG4DQ86TL0 Y_RNA.629-201ENST00000411368 105 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 BX510359.2-201ENST00000417920 305 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AL353621.1-201ENST00000418219 243 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 RPS15AP40-201ENST00000419621 391 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4DQ86TL0 Z74021.1-201ENST00000423610 407 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AC087650.1-201ENST00000431445 468 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AC009220.1-201ENST00000451614 275 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AL354710.1-201ENST00000453641 246 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AC010326.1-201ENST00000462726 602 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 HMGB1P25-201ENST00000468402 607 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AC006463.2-201ENST00000473326 348 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AC012158.1-204ENST00000483430 465 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.24□□□□□ -1.73
ATG4DQ86TL0 RNU1-86P-201ENST00000516108 154 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 RN7SKP276-201ENST00000516242 268 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 Y_RNA.679-201ENST00000516416 91 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 RNU1-107P-201ENST00000516617 154 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AL110118.1-201ENST00000553543 400 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 MIR4659A-201ENST00000580269 81 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms